Topic: fastq-files Goto Github
Some thing interesting about fastq-files
Some thing interesting about fastq-files
fastq-files,FLiCK - Format LeveragIng Compression frameworK
User: aaiezza
fastq-files,simple and convenient program to convert fasta sequences to fastq sequences
User: abhijeetsingh1704
fastq-files,A python script to convert FASTQ to FASTA
User: adiamb
fastq-files,ALAPY COMPRESSOR: FASTQ lossless compressor
Organization: alapy
fastq-files,An efficient FASTQ manipulation suite
User: alastair-droop
fastq-files,Collecting Genotypes from ENA and make their SNPs
User: amirhoseinsafari
fastq-files,A (very) fast program for getting statistics about a fastq file, the way I need them, written in Rust
User: angelovangel
fastq-files,k-mer similarity metrics for two fastx files
User: angelovangel
fastq-files,Obtain k-mer counts from fastx files
User: angelovangel
fastq-files,work with the time stamps of Oxford Nanopore (ONT) fastq files
User: angelovangel
fastq-files,a shiny frontend for the nextflow-fastp pipeline
User: angelovangel
fastq-files,A simple nextflow pipeline for Illumina run metrics (InterOp) and generation of fastq files (bcl2fastq)
User: angelovangel
fastq-files,A simple fastp-MultiQC nextflow pipeline
User: angelovangel
fastq-files,This Github repository contains the files used to perform a master thesis about antibiotic resistance genes in wastewater.
User: anna-pico
fastq-files,Collection of simple C scripts for parsing vcf or bam files using the htslib C library. These scripts can be used as the starting point for more complex scripts
Organization: biodata-fun
fastq-files,Parse and process FASTA and FASTQ formatted files of biological sequences.
Organization: biojulia
Home Page: https://biojulia.dev
fastq-files,Datastores for reads, not your papa's FASTQ files.
Organization: biojulia
fastq-files,QIIME2 worklflow. From raw data to a feature table.
User: biomarv
fastq-files,Fast FASTA/Q parser and writer (C++ re-implementation of kseq library)
User: cartoonist
fastq-files,A sorting method for encoding metagenomic data
Organization: cobilab
fastq-files,Basic operations with fastq files
Organization: codingene
Home Page: https://codingene.github.io/nextflow-base
fastq-files,Web app for CRISPR experiment setup and analysis
Organization: czbiohub-sf
fastq-files,The DKFZ alignment workflow plugin originally developed at the eilslabs
Organization: dkfz-odcf
Home Page: https://github.com/DKFZ-ODCF/AlignmentAndQCWorkflows/wiki
fastq-files,Nextflow-based BAM-to-FASTQ conversion and FASTQ-sorting workflow.
Organization: dkfz-odcf
fastq-files,Nextflow script for processing WGS data
User: ellisrichardj
fastq-files,Software for the analysis and visualization of site-saturation mutagenesis experiments
User: fhidalgor
fastq-files,Pipeline to process RNAseq and ChIPseq data. Outputs include gene counts, transcripts per million, alternate splicing events, SNP calls, and bigwigs. Supports both Docker and Singularity for all dependencies.
Organization: frietzelabuvm
fastq-files,R-package to analyse data from the immuno-detection by sequencing (ID-seq) technology.
User: jessievb
Home Page: https://www.nature.com/articles/s41467-018-04761-0
fastq-files,Fast k-mer based tool for multi locus sequence typing (MLST)
Organization: jordanlab
fastq-files,:construction_worker: Fasten toolkit, for streaming operations on fastq files
User: lskatz
fastq-files,downsample fasta/fastq files to given number of base pairs
User: luptior
fastq-files,Tool for generating artificial fastq files which can be used for testing the fidelity of NGS analysis pipelines.
User: mframpton
fastq-files,LAVA: Longitudinal Analysis of Viral Alleles
User: michellejlin
fastq-files,Analysis pipeline for processing paired-end Illumina reads obtained after ancient mtDNA target enrichment capture.
User: mnievesc
fastq-files,Package to merge multiple pair of pair-end fastq data
Organization: msk-access
Home Page: https://merge-fastq.readthedocs.io
fastq-files,Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.
User: nunofonseca
fastq-files,less like viewer for fastq files
User: openpaul
fastq-files,Super ultra-fast fastq preprocessor, using parallel windowed adaptive trimming.
User: pentalpha
fastq-files,ConsensusCruncher is a tool that suppresses errors in next-generation sequencing data by using unique molecular identifiers (UMIs) to amalgamate reads derived from the same DNA template into a consensus sequence.
Organization: pughlab
Home Page: https://academic.oup.com/nar/advance-article/doi/10.1093/nar/gkz474/5498633
fastq-files,Calculate fastq reads and sequencing coverage
User: raymondkiu
fastq-files,A versatile compressor of third generation sequencing reads.
Organization: refresh-bio
fastq-files,R functions and workflow for submitting amplicon sequence data to the ENA.
User: robiwangriff
fastq-files,FASTQ compression
User: shubhamchandak94
fastq-files,program for splitting a fastq file into separate files
User: stevekm
fastq-files,Command line utility for manipulating Illumina-generated FASTQ files.
Organization: stjude-rust-labs
fastq-files,Easier download/extract of FASTA/Q read data and metadata from the ENA, NCBI, AWS or GCP.
User: wwood
Home Page: https://wwood.github.io/kingfisher-download
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