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absolut

Unconstrained lattice antibody-antigen bindings generator

bin-parser

General binary file parser.

bioconda-recipes

Conda recipes for the bioconda channel.

biophi

BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluation (OASis) and an interface for computer-assisted antibody sequence design.

biophi.dichlab.org

Deployment repository for biophi.dichlab.org

data-science-for-beginners

10 Weeks, 20 Lessons, Data Science for All!

fastq_utils

Validation and manipulation of FASTQ files, scRNA-seq barcode pre-processing and UMI quantification.

flask-boilerplate

Boilerplate template for a Python Flask application with Flask-SQLAlchemy, Flask-WTF, Fabric, Coverage, and Bootstrap

hts-specs

Specifications of SAM/BAM and related high-throughput sequencing file formats

icgc_rnaseq_align

irap

integrated RNA-seq Analysis Pipeline

lineagesequencediscovery

Automatically exported from code.google.com/p/lineagesequencediscovery

logchem

LogCHEM is a tool for discriminative interactive mining of chemical fragments.

loop_modeling

A loop modeling benchmark capture containing the benchmark dataset and benchmarked protocol captures.

ml-for-beginners

12 weeks, 26 lessons, 52 quizzes, classic Machine Learning for all

msi

pipelines-api-examples

Examples for the Google Genomics Pipelines API.

propythia

Python generic modular semi-automated platform containing functions for the classification of proteins based on their physicochemical properties using ML.

pybadges

A Python library for creating Github-style badges

python-genbadge

A library to generate badges for typical checks (flake8, pytest, coverage, etc.)

rsynapseclient

The R programmatic interface to Synapse services

saab_plus

sadie

The Complete Python Antibody Library

sapiens

Sapiens is a human antibody language model based on BERT.

sv2gf

teachingmaterial

RNA-seq data analysis practical