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Maria A. Nieves Colon's Projects

ancient_mtdna_pipeline icon ancient_mtdna_pipeline

Analysis pipeline for processing paired-end Illumina reads obtained after ancient mtDNA target enrichment capture.

enah_curso_adna_2019 icon enah_curso_adna_2019

This repository contains practical data analyses exercises for the special course on Paleogenomics and Anthropology held at the National School of Anthropology of Mexico (ENAH), May 6 to 10, 2019. Topics include performing QC on aDNA NGS data, assigning mtDNA haplogroups and testing hypotheses w/PCA and ADMIXTURE analyses. No previous command-line experience needed.

short-awk-tutorial icon short-awk-tutorial

Introduction to awk. The tutorial below is designed to be completed in ~40-45 minutes by anyone with basic understanding of UNIX.

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