Coder Social home page Coder Social logo

fastq_to_fasta's Introduction

FASTQ_to_FASTA

A python script to convert FASTQ to FASTA, three arguments are required 1 - FASTQ file 2 - filename of the fasta 3 - gzipped file ?

python FASTQ_to_FASTA.py .fastq.gz .fasta gz

fastq_to_fasta's People

Stargazers

 avatar  avatar  avatar  avatar

Watchers

 avatar

fastq_to_fasta's Issues

Fastq to fasta convert

Please check the issue of why I am getting errors?
'conda install -c bioconda/label/cf201901 seqtk
seqtk seq -A /Users/shreyasaha/Desktop/starrseq_preprocessed_for_sharing/RandomPE_IRanPE.sub10p.R1.noDup.pairedFiltered 2.fastq > output_file.fasta

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.