Topic: repeats Goto Github
Some thing interesting about repeats
Some thing interesting about repeats
repeats,Non-Repetitive Parts Calculator - Automated design and discovery of non-repetitive genetic parts for engineering stable genetic systems
User: ayaanhossain
repeats,This is a tool for finding micro satellites in a chromosome.
Organization: bioinformaticstoolsmith
repeats,Identify and characterize repeat expansions in long read data
User: caspargross
repeats,A C++ tandem repeat finding library
User: dancooke
repeats,Different approaches to calculate mappability and GC-rich tracks for danio rerio genomes
User: dgavr
Home Page: https://www.biorxiv.org/content/biorxiv/early/2017/11/22/213611.full.pdf
repeats,De novo repeat inference from long reads
User: fcunial
repeats,GenomeTools genome analysis system.
Organization: genometools
Home Page: http://genometools.org
repeats,Find palindrome/inverted repeats in contigs/scaffolds
User: jnarayan81
repeats,Explore palindromes
User: jnarayan81
repeats,Project Job Insights (Python)
User: kelsonbatista
repeats,A framework for extracting telomeric reads from single-molecule sequencing experiments, describing their sequence variation and motifs, and for haplotype inference.
User: lankycyril
Home Page: https://www.biorxiv.org/content/10.1101/2020.01.31.929307v1
repeats,A video player component for looping inner sections of video. Packaged as an npm library and cdn script.
User: lewhunt
Home Page: https://lewhunt.github.io/react-video-looper/
repeats,An ultrafast tool for genome-wide survey of microsatellites and primer design
User: lmdu
Home Page: http://krait.biosv.com
repeats,a python package for finding tandem repeats from genomic sequences
User: lmdu
Home Page: https://pytrf.readthedocs.io
repeats,A bioinformatics best-practice analysis pipeline for calling structural variants (SVs), copy number variants (CNVs) and repeat region expansions (RREs) from short DNA reads
Organization: nf-cmgg
Home Page: https://nf-cmgg.github.io/structural/
repeats,A command line tool to try executing a shell command and retry if it fails. Optionally repeat with time intervals even if it succeeds. 🔁 https://www.npmjs.com/package/try-cli
User: preethamvishy
repeats,De novo repeat inference from long reads
Organization: revantorg
repeats,Transposable Element Subfamily Detection
User: rmhubley
repeats,Some of the mapping and normalization scripts used in our NCB paper PMID:31209294
User: sirusb
repeats,The Read Origin Protocol (ROP) is a computational protocol that aims to discover the source of all reads, including those originating from repeat sequences, recombinant B and T cell receptors, and microbial communities.
User: smangul1
Home Page: https://github.com/smangul1/rop/wiki
repeats,SLURM-ready bash scripts to run the complete REPET pipeline
Organization: stajichlab
repeats,Identify and find telomeres, or telomeric repeats in a genome.
Organization: tolkit
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