Topic: de-novo-assembly Goto Github
Some thing interesting about de-novo-assembly
Some thing interesting about de-novo-assembly
de-novo-assembly,Algorithm to parse, assemble and align genomic sequences by use machine learning techniques. The resulting sequences are used to form NCBI-BLAST respects and return sequence homologs.
User: alepidoptera7
de-novo-assembly,Compacted and colored de Bruijn graph construction and querying
Organization: algbio
de-novo-assembly,SMP: A Salmonella Methylation analysis Pipeline
User: aukehaver
de-novo-assembly,Targeted analysis of alternative polyadenylation of candidate genes with RNA-Seq data
Organization: bcgsc
de-novo-assembly,Long read production pipelines
Organization: broadinstitute
Home Page: https://broadinstitute.github.io/long-read-pipelines/
de-novo-assembly,A compilation of all the programs in my bioinformatics course
User: charliescodes
de-novo-assembly,BLEND is a mechanism that can efficiently find fuzzy seed matches between sequences to significantly improve the performance and accuracy while reducing the memory space usage of two important applications: 1) finding overlapping reads and 2) read mapping. Described by Firtina et al. (published in NARGAB https://doi.org/10.1093/nargab/lqad004)
Organization: cmu-safari
de-novo-assembly,De Bruijn graph-based De Novo genome assembly CLI tool
User: denisverkhoturov
de-novo-assembly,Genome assembler de novo that uses De Bruijn graph.
User: denisverkhoturov
de-novo-assembly,De novo repeat inference from long reads
User: fcunial
de-novo-assembly,Bio Big Data and Precision Medicine Training Course
User: jeongu
de-novo-assembly,Material used for a course on transcriptomics, covering transcriptome assembly, transcriptome functional annotation, differential expression analysis, and functional annotation data mining
User: jungsoh
de-novo-assembly,Updated Reference Genome Sequence and Annotation of Mycobacterium bovis AF2122/97
User: kerrimalone
de-novo-assembly,Deep learning model for classifying reads in de novo genome assembly.
User: lvrcek
de-novo-assembly,Damage parameter estimation for ancient DNA
User: maxibor
de-novo-assembly,UNItig construction in PARallel with CPUs and GPUs
Organization: rapidsathkust
de-novo-assembly,De novo repeat inference from long reads
Organization: revantorg
de-novo-assembly,Yet Another De Novo Assembler (not finished)
User: scarletblizzard
de-novo-assembly,This is the codebase for Faucet, described in our manuscript: https://academic.oup.com/bioinformatics/article/34/1/147/4004871, by Roye Rozov, Gil Goldshlager, Eran Halperin, and Ron Shamir
Organization: shamir-lab
de-novo-assembly,Scripts for de novo genome assembly
User: wanyuac
de-novo-assembly,Cleavage site prediction via de novo assembly
User: zyxue
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