Topic: bioconda Goto Github
Some thing interesting about bioconda
Some thing interesting about bioconda
bioconda,snakemake pipeline for gatk running on binder
User: alperyilmaz
bioconda,Cython bindings and Python interface to Prodigal, an ORF finder for genomes and metagenomes. Now with SIMD!
User: althonos
Home Page: https://pyrodigal.readthedocs.org
bioconda,A beginner’s guide to Bioinformatics
User: asadprodhan
bioconda,A flexible pipeline for complete analysis of bacterial genomes
Organization: bactopia
Home Page: https://bactopia.github.io
bioconda,Analysis of mutations at codon 625 of SF3B1 gene in uveal melanoma
Organization: bio-tagi
Home Page: https://bio-tagi.github.io/Hackathon/
bioconda,Communities dump their resource/software information, and have them merged
Organization: bio-tools-community
bioconda,Data analysis related to the bioconda paper
Organization: bioconda
bioconda,Generating various plots for the bioconda homepage
Organization: bioconda
bioconda,BioContainers Documentation.
Organization: biocontainers
Home Page: http://biocontainers-edu.biocontainers.pro
bioconda,Bioconda Recipe Generator (BiRG) is an heuristic approach to automatically generating recipes for Bioconda
Organization: birgorg
bioconda,Build a Reproducible Jupyter Workflow From Scratch (2017 NIH Hour of Code)
User: burkesquires
bioconda,Chanjo provides a better way to analyze coverage data in clinical sequencing.
Organization: clinical-genomics
Home Page: https://clinical-genomics.github.io/chanjo/
bioconda,🦠📇 Microbial genomes-to-report pipeline
User: cmkobel
Home Page: https://CompareM2.readthedocs.io
bioconda,bioinfomatics version of kitematic base on bioconda.
User: daydream-boost
bioconda,MEGA ATAC-seq Workflow implementation
User: dfloresdil
bioconda,bacterial strain identification
User: fatmakahveci
bioconda,Structural variation caller using third generation sequencing
User: fritzsedlazeck
bioconda,Toolset for SV simulation, comparison and filtering
User: fritzsedlazeck
bioconda,Contains scripts to study the impact of publishing software to package management systems on their scholarly recognition.
Organization: genometric
Home Page: https://genometric.github.io/TVQ/
bioconda,Methods for training and interpretation of an ensemble of neural networks for multi-task functional prediction of accessibility or histone modifications from DNA sequence.
Organization: gifford-lab
bioconda,Training an interpretation of ensemble of convolutional neural networks for multi-task functional genomic classification tasks.
User: jhammelman
bioconda,This project aims do describe and explore the metagenomes of fern species of the genus Azolla.
User: lauralwd
bioconda,Run_dbcan V4, using genomes/metagenomes/proteomes of any assembled organisms (prokaryotes, fungi, plants, animals, viruses) to search for CAZymes.
User: linnabrown
Home Page: http://bcb.unl.edu/dbCAN2
bioconda,Linux command-line to analyse next-generation sequencing (NGS) data
User: lucianhu
bioconda,A tutorial on how to produce your own bioConda package repository search engine
User: makethebrainhappy
bioconda,A quick overview of how to use Bioconda, and create recipes
Organization: monashbioinformaticsplatform
Home Page: https://monashbioinformaticsplatform.github.io/bioconda-tutorial/
bioconda,Aggregate results from bioinformatics analyses across many samples into a single report.
Organization: multiqc
Home Page: http://multiqc.info
bioconda,Containers for running ESM related tools
Organization: nordicesmhub
Home Page: https://nordicesmhub.github.io/containers/
bioconda,A lightweight tool to find clusters of samples within a phylogeny.
Organization: pathogenomics-lab
bioconda,NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations
User: philres
bioconda,🚀 Top level project management for conda-forge CZI grant
Organization: quansight-labs
Home Page: https://github.com/orgs/Quansight-Labs/projects/10
bioconda,🔬 Bioinformatics Notebook. Scripts for bioinformatics pipelines, with quick start guides for programs and video demonstrations.
User: rnnh
Home Page: https://rnnh.github.io/bioinfo-notebook/
bioconda,The BWA v0.7.17 read mapper, build from bioconda
User: sghignone
bioconda,SAMtools and BCFtools (v1.10) for manipulating next-generation sequencing data, from bioconda
User: sghignone
bioconda,Practical Guide to Reproducibility in Bioinformatics (Work In Progress)
User: sk-sahu
Home Page: http://sk-sahu.github.io/PGRB/
bioconda,⛰ covtobed | Convert the coverage track from a BAM file into a BED file
User: telatin
bioconda,Qiime2 Artifact eXtractor
User: telatin
Home Page: https://telatin.github.io/qax/
bioconda,:rocket: seqfu - Sequece Fastx Utilities
User: telatin
Home Page: https://telatin.github.io/seqfu2
bioconda,Reproducible bioinformatics pipelines in python. Import any Unix tool/command in python.
User: urmi-21
bioconda,genes and genomes at your fingertips
Organization: vanheeringen-lab
Home Page: https://vanheeringen-lab.github.io/genomepy/
bioconda,Recommendations to contenarized your bioinformatics software
User: ypriverol
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