Name: Laura Dijkhuizen
Type: User
Company: @utrechtuniversity
Bio: Scientist in training. Plant biology, plant microbial ecology and meta-genomics.
Also see https://gist.github.com/lauralwd
Twitter: lauraazolla
Location: Utrecht, Netherlands
Blog: www.lauradijkhuizen.com
Laura Dijkhuizen's Projects
This project aims do describe and explore the metagenomes of fern species of the genus Azolla.
Phylogeny and classification of Azolla filiculoides MYB genes
My PhD thesis on the (meta)genomics of the amazing floating fern: Azolla
A workshop on datavisualisation of distribution data, without barcharts!
a bash shell script to make focus stacked timelapses of plants using gphoto2
Phylogenetic tree of LAR and other PIP family enzymes as shown in Güngör et al. 2020. This repository details all code and intermediate files used.
See rendered website at www.lauradijkhuizen.com
Manual workflows for making phylogenetic trees in jupyter notebooks
Write a LaTeX paper in markdown.
Marlin is an optimized firmware for RepRap 3D printers based on the Arduino platform. | Many commercial 3D printers come with Marlin installed. Check with your vendor if you need source code for your specific machine.
Hands-on workflow for learning metagenomics including DNA mapping, binning, QC and annotation. Answers and example code available in the branch 'example' or on the practical webpage:
mikc tree
Project on the pangenomics of Nostoc azollae, endosymbiont of the Azolla genus