Topic: differential-gene-expression Goto Github
Some thing interesting about differential-gene-expression
Some thing interesting about differential-gene-expression
differential-gene-expression,Differential Gene Analysis of Telomere Microarray Data
User: amandahsr
differential-gene-expression,RNA-Seq data analysis: Quantification, Differential Gene Expression, Differential Transcripts Usage
User: angrymaciek
differential-gene-expression,Pipeline for analyzing RNAseq data of human and mouse - beginner friendly with minimal user inputs
User: arkanivasarkar
differential-gene-expression,RNA-seq alignment and analysis pipeline
User: ben-laufer
differential-gene-expression,GSE147507 SARS-Cov-2 Dataset from Mt. Sinai
Organization: benaroyaresearch
differential-gene-expression,Convert differential gene expression signatures for diseases from ADEPTUS to BEL
Organization: bio2bel
differential-gene-expression,Performed a differential gene expression analysis with RNA-seq on three immunologically diverse mouse models. Differentially expressed genes were identified and a GO term enrichment analysis was done to determine their roles.
User: bissessk
differential-gene-expression,DEMUX, ALIGN, DESEQ2 DGE CALLS
User: bixbeta
differential-gene-expression,DESeq2Shiny2 is an R shiny application to handle NGS count data and perform unsupervised clustering and Differential Gene Expression Analysis using DESeq2.
User: bixbeta
differential-gene-expression,Python framework for explainable omics analysis
User: breimanntools
Home Page: https://xomics.readthedocs.io
differential-gene-expression,Differential Gene Expression, Phylogenetic tree, Sequence Alignments, Biostatistics, Bioinformatic
User: cankocagil
differential-gene-expression,single cell and bulk RNASeq analysis scripts
User: cemalley
differential-gene-expression,Analysis of single and comparative transcriptomes
User: csoderlund
Home Page: http://www.agcol.arizona.edu/software/tcw
differential-gene-expression,Code and figures for the Differential Causal Inference (DCI) algorithm
User: csquires
differential-gene-expression,ASAP : Automated Single-cell Analysis Pipeline
Organization: deplanckelab
Home Page: https://asap.epfl.ch
differential-gene-expression,The package RNAseqAnalysis does the complete analysis of RNA seq data starting from raw reads. It provides the user with differnt functions like generation of qc report, filtering, assembly and GO-term annotation, differential expression analysis and heatmap generation, and Alternative splicing-site prediction
User: disc-iisr
differential-gene-expression,Bayesian Gene Selection Criterion (BGSC) approach
Organization: grosselab
differential-gene-expression,Viper is a Snakemake workflow, aimed at performing the RNA-seq workflow of the paper 'Causes and consequences of a glutamine induced normoxic HIF1 activity for the tumor metabolism', Kappler et al. (2019) in a reproducible and automated manner
Organization: grosselab
differential-gene-expression,Laboratory of biological Data Mining :computer:
User: iamandreatonina
differential-gene-expression,Reproducibility Analysis on Genomic Impact Transformer (GIT)
User: jackxu2333
differential-gene-expression,An R package: RNA structure and Expression analysis
User: jackxu2333
differential-gene-expression,Bioinformatic scripts for working on the UiO Abel compute cluster
User: jonbra
Home Page: https://github.com/jonbra/NGS-Abel/wiki
differential-gene-expression,RNA-seq analysis pipeline
User: jumagari14
differential-gene-expression,Complete Pipeline for RNA-seq data analysis: From FastQ to differntial gene expression to annotated Variations.
User: kashiff007
differential-gene-expression,Differential Gene Expression (DGE) Analysis in Curated Microarray Data of Breast Cancer Subtypes
User: kmyafi
differential-gene-expression,RNA-seq analysis workflow using DESeq2
User: koushik20
differential-gene-expression,Scripts to run differential expression analysis using DESeq2 package
User: kpatel427
differential-gene-expression,📊 An R package of RNA-seq workflow
User: kuanhao-chao
Home Page: https://doi.ieeecomputersociety.org/10.1109/TCBB.2019.2956708
differential-gene-expression,An integrative resource for deubiquitinating enzymes (DUBs) served at https://labsyspharm.github.io/dubportal
Organization: labsyspharm
Home Page: https://labsyspharm.github.io/dubportal/
differential-gene-expression,Experimental code for analysis of miRNA expression in C2C12 vs. in vivo mice cells
User: maroonapricot
differential-gene-expression,Workflow for differential gene expression analysis for non-replicate samples using DEGseq
User: meeranhussain
differential-gene-expression,Differential gene expression analysis for samples with replicates using STAR-DeSeq2 pipeline
User: meeranhussain
differential-gene-expression,These are tutorials on a subset of tools available for processing raw RNAseq data. This if for HISAT2_SAMtools_Stringtie_gffcompare_ballgown pipeline or HISAT2_SAMtools_Stringtie_PrepDEanalysis.py_DESeq2 pipeline
User: mppl1
differential-gene-expression,Gene-level general linear mixed model
User: myles-lewis
Home Page: https://myles-lewis.github.io/glmmSeq/
differential-gene-expression,Pipeline for differential gene expression (DGE) and differential transcript usage (DTU) analysis using long reads
Organization: nanoporetech
differential-gene-expression,Workshop • Analysis of RNA-seq data
Organization: nbisweden
Home Page: https://NBISweden.github.io/workshop-RNAseq
differential-gene-expression,Interactive R package to quantify, analyse and visualise alternative splicing
User: nuno-agostinho
Home Page: http://nuno-agostinho.github.io/psichomics/
differential-gene-expression,R scripts and input data for RNAseq differential gene expression without a reference genome from Ramos-Silva, Odendaal et al. 2022
User: paulars
differential-gene-expression,Curare - A customizable and reproducible analysis pipeline for RNA-Seq experiments
User: pblumenkamp
Home Page: https://github.com/pblumenkamp/Curare
differential-gene-expression,An application for exploring and visualizing differential gene expression data created with DESeq2
User: pblumenkamp
differential-gene-expression,Analysis on the acquired genes (365 genes from Glioma patients)-in relation to the paper https://www.nature.com/articles/sdata201724
User: sandrabinoy
differential-gene-expression,:tangerine: View the gene expression response to TNF and IL-17A with vanilla Javascript and HTML.
User: slowkow
Home Page: https://immunogenomics.io/fibrotime
differential-gene-expression,Comparison of gene usage in immune repertoires under different biological conditions
User: snaketron
differential-gene-expression,bioTEA - A user friendly tool to perform transcript expression analysis
Organization: tcp-lab
differential-gene-expression,A set of functions to parse and open (search query) links to genomics related and other websites for R. Useful when you want to explore e.g.: the function of a set of differentially expressed genes.
User: vertesy
Home Page: https://vertesy.github.io/DatabaseLinke.R/
differential-gene-expression,Cellular signatures characterisation after carcinogenic chemical exposure in mammalian tissue.
User: viktormiok
differential-gene-expression,Temporal Integrative Genomics Analysis in R
User: viktormiok
differential-gene-expression,Script to automate differential expression analysis using DESeq2, edgeR or limma-voom
User: wdecoster
differential-gene-expression, Differential expression (DE); gene set Enrichment Analysis (GSEA); single cell RNAseq studies (scRNAseq)
Organization: xzhoulab
differential-gene-expression,Worked with fellow peers at University of Pittsburgh under supervision of Dr. Junshu Bao, Department of Statistics, University of Pittsburgh, to do a Differential Gene Expression Analysis on a Dexamethasone treatment data set and incorporated Machine Learning into project.
User: yogionbioinformatics
Home Page: https://www.ncbi.nlm.nih.gov/books/NBK10061/
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