wook2014 Goto Github PK

cactus

Official home of genome aligner based upon notion of Cactus graphs

cafe5

Version 5 of the CAFE phylogenetics software

cafe_fig

A tool to extract and visualize the results of CAFE (Computational Analysis of gene Family Evolution)

calculator

Windows Calculator: A simple yet powerful calculator that ships with Windows

cat-bat

CAT-BAT: tool for taxonomic classification of contigs and metagenome-assembled genomes (MAGs)

catlynet

Autocatalytic networks

cbnplot

Bayesian network plot for the enrichment analysis results

cdhit

Automatically exported from code.google.com/p/cdhit

cegma_v2

The final version 2 release of our software to detect core genes in eukaryotic genomes

cegma_v3

CEGMA (Core Eukaryotic Genes Mapping Approach), for building a highly reliable set of gene annotations in the absence of experimental data.

cell_blast

A BLAST-like Toolkit for large-scale scRNA-seq Data Querying and Annotation.

cellbase

High-Performance NoSQL database and RESTful web services to access to most relevant biological data

centrifuge

Classifier for metagenomic sequences

centurion

cesar2.0

cgview

CGView is a Java package for generating high-quality, zoomable maps of circular genomes.

chameleonmini

The ChameleonMini is a versatile contactless smartcard emulator compliant to NFC. The ChameleonMini was developed by https://kasper-oswald.de. The device is available at https://shop.kasper.it. For further information see the Getting Started Page https://rawgit.com/emsec/ChameleonMini/master/Doc/Doxygen/html/_page__getting_started.html or the Wiki tab above.

checkm

Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes

chewbbaca

BSR-Based Allele Calling Algorithm

chrom-compare

To efficiently read in chromosome-sized, aligned sequences and compare them

chromsyn

Chromosome-level synteny plotting using orthologous regions

circlize

Circular visualization in R

circtools

circtools: a modular, python-based framework for circRNA-related tools that unifies several functionalities in a single, command line driven software.

clash

A rule-based tunnel in Go.

clinker

Gene cluster comparison figure generator

clonalframeml

ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes

clouseau

A QC suite for large VCF files

clumsy

clumsy makes your network condition on Windows significantly worse, but in a controlled and interactive manner.

clustal-omega

Multiple sequence aligner for protein and DNA/RNA.

clusterflow

A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.