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wook2014's Projects

vcf2dis icon vcf2dis

VCF2Dis: A new simple and efficient software to calculate p-distance matrix based Variant Call Format

vcf2maf icon vcf2maf

Convert a VCF into a MAF, where each variant is annotated to only one of all possible gene isoforms

vcfanno icon vcfanno

annotate a VCF with other VCFs/BEDs/tabixed files

vdhcoapp icon vdhcoapp

Companion application for Video DownloadHelper browser add-on

vegan icon vegan

R package for community ecologists: popular ordination methods, ecological null models & diversity analysis

velvet icon velvet

Short read de novo assembler using de Bruijn graphs

verkko icon verkko

A hybrid genome assembly pipeline developed for telomere-to-telomere assembly

vg icon vg

tools for working with genome variation graphs

vibrant icon vibrant

Virus Identification By iteRative ANnoTation

vica icon vica

Vica: Software to identify highly divergent DNA and RNA viruses and phages in microbiomes

vir icon vir

ViR is designed to solve the dispersion of reads due to intrasample variability for a reliable identification of lateral gene transfer events, with a focus on viral integrations

virfinder icon virfinder

VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data

virmet icon virmet

Set of tools for viral metagenomics.

virsorter2 icon virsorter2

customizable pipeline to identify viral sequences from (meta)genomic data

virtect icon virtect

Detection of viruses from RNA-Seq on human samples

vrca icon vrca

Identifying ViRal and Circular content in metAgenomes

vrhyme icon vrhyme

Binning Virus Genomes from Metagenomes

vtools icon vtools

Various tools operating over VCF files. Uses cyvcf2 and cython under the hood for speed

waifu2x-extension-gui icon waifu2x-extension-gui

Image, GIF and Video enlarger/upscaler(super-resolution) achieved with Waifu2x, SRMD, RealSR, Anime4K and ACNet.

wally icon wally

Wally: Visualization of aligned sequencing reads and genomic variants.

warp icon warp

WARP one-click script. Add an IPv4, IPv6 or dual-stack CloudFlare WARP network interface and Socks5 proxy for VPS. 一键脚本

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