Topic: genome-sequencing Goto Github
Some thing interesting about genome-sequencing
Some thing interesting about genome-sequencing
genome-sequencing,Reconstructs complex variation using Bionano optical mapping data and breakpoint graph data
Organization: ampliconsuite
genome-sequencing,Automated Tool for Global Screening Array analysis
User: anilprakash94
genome-sequencing,Implemented Different Searching Algorithms to find a particular Genome Sequence.
User: atul-acharya-17
genome-sequencing,ChromeQC: Summarize sequencing library quality of 10x Genomics Chromium linked reads
Organization: bcgsc
Home Page: https://bcgsc.github.io/chromeqc
genome-sequencing,A modern genomics framework for julia
Organization: biojulia
Home Page: https://biojulia.dev
genome-sequencing,De novo assembly of the red legged patridge (Alectoris rufa) genome
User: biomodellab
genome-sequencing,Viral genomics analysis pipelines
Organization: broadinstitute
genome-sequencing,Pan-genomic sequence analysis
User: chadlaing
Home Page: http://lfz.corefacility.ca/panseq
genome-sequencing,UpPipe is an RNA abundance quantification design on a real processing-near-memory system (UPMEM DPU); the paper of this project is published in Design Automation Conference (DAC) 2023
User: chi-0828
Home Page: https://doi.org/10.1109/DAC56929.2023.10247915
genome-sequencing,DNA sequencing analysis notes from Ming Tang
User: crazyhottommy
genome-sequencing,Allele-specific copy number estimation with whole genome sequencing
Organization: dkfz-odcf
Home Page: http://aceseq.readthedocs.io
genome-sequencing,Language Programing - R / Genome sequencing
User: franciscogarciaa49
genome-sequencing,Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls
Organization: ga4gh
genome-sequencing,Analysis of subclonal copy number alterations (CNA) and loss of heterozygosity (LOH) in cancer
User: gavinha
genome-sequencing,TREDPARSE: HLI Short Tandem Repeat (STR) caller
Organization: humanlongevity
genome-sequencing,This is a pipeline describing how I assembled the complete genome of the freshwater angelfish, Pterophylllum scalare.
User: indeeverm
genome-sequencing,Parallelization of Genome Sequence Comparison
User: jacobjmarks
genome-sequencing,Bioinformatics library written in C++.
User: jflopezfernandez
genome-sequencing,A suite of bioinformatics tools for interacting with high throughput sequencing (HTS) data, written entirely in Rust
User: jrhawley
genome-sequencing,Extensible full DAG streaming computation server with services and jobs for RNA-Seq, Tn-Seq, WG-Seq and Term-Seq.
User: jsa-aerial
genome-sequencing,H.E.L.E.N. (Homopolymer Encoded Long-read Error-corrector for Nanopore)
User: kishwarshafin
genome-sequencing,HiCBricks offers user-friendly and efficient solutions for handling large high-resolution Hi-C datasets. The package provides a R/Bioconductor framework with the bricks to build more complex data analysis pipelines and algorithms.
User: koustav-pal
genome-sequencing,A Python script that align SARS-CoV-2 genomes identifying and reporting pointwise variations.
User: lilquacky
genome-sequencing,Bioinformatics on GCP, AWS or Azure
User: lynnlangit
genome-sequencing,Coursera Bioinformatics / Stepik Genome Sequencing with seq-lang
User: mationai
genome-sequencing,A repository containing all the file projects that I have for the Bioinformatics 2 (COMP 4312a) course.
User: mikorabago
genome-sequencing,Extensions for Clarity
Organization: molmed
genome-sequencing,Assembled Phi-X174 genome using Overlap Graph, Kmer Composition and De-Bruijn Graph.
User: navjindervirdee
genome-sequencing,A collection of publications on comparison of high-throughput sequencing technologies.
User: nazeeefa
genome-sequencing,This repository on GitHub contains a Python program that uses data science techniques to calculate the percentage of cytosine and guanine in a genome sequence. Cytosine and guanine are two of the four nucleotide bases found in DNA, and their percentage can be used as a measure of the overall composition of a genome.
User: rakeshkanneeswaranofficial
genome-sequencing,This project is based on starting Bioinformatics as a life science student. Initializing a career as a Genetic Data Scientist and Bioinformatician.
User: rakibhhridoy
Home Page: https://rakibhhridoy.github.io
genome-sequencing,Python program that reports nucleotide and dinucleotide frequencies of a genome
User: rrando10
genome-sequencing,A dotplot application for DNA/RNA sequence
User: s-andrews
genome-sequencing,a combination of the gawk and the awk basic compiler to create a function that will estimate the aligned genome fractions from the paf alignment of the genome long reads to the genome. This includes multiple functions which also allow for the filtering of the quality alignments before estimating the genome length coverage.
User: sablokgaurav
genome-sequencing,a genome reference estimation based on the peak size calibration and the given the values of the peak size calibration will estimate the genome and the sub genome fraction.
User: sablokgaurav
genome-sequencing,a custom function which can be used to prepare the files for the genotyping or the sequencing. You can specify the path and the fasta files and mark them according to the desired condition for the genotyping or sequencing
User: sablokgaurav
genome-sequencing,a function to calculate the genome annotation for the microbiome and also for the other genomes. It will take a genome annotation or a text file and will prepare the count and also for the gene ontology analysis
User: sablokgaurav
genome-sequencing,a slurm configuration analytical pipline for the analysis of the pacbiohifi sequencing genomes using the verkko, hifiasm and the genomeasm4pg. only provide the link to the sequencing or the files with the folder and rest it will do the work
User: sablokgaurav
genome-sequencing,A set of functions which will provide easy access and cleaned gff from tair and uses a dataframe and datascience approach to get the systematic tair ids and their coordinates from the tair 10 gff version. It can be applied to any version of the tair for getting the systematic retrival of the tair ids.
User: sablokgaurav
genome-sequencing,A crash course in scATAC-seq data processing
User: tacazares
genome-sequencing,Python library to facilitate genome assembly, annotation, and comparative genomics
User: tanghaibao
genome-sequencing,Personalized Genomics and Proteomics. Main diet: Ensembl, side dishes: SNPs
User: tariqdaouda
Home Page: http://pygeno.iric.ca
genome-sequencing,A high-fidelity prototype of the genomic medicine assistant web application
Organization: tirilab
Home Page: http://tirilab.github.io/gma
genome-sequencing,KubeGene - A turn-key Genome Sequencing workflow management framework
Organization: volcano-sh
Home Page: http://kubegene.io
genome-sequencing,map and call next generation genomic sequencing
Organization: wingolab-org
genome-sequencing,Asynchronous Distributed Actor-based Approach to Jaccard Similarity for Genome Comparisons
User: youssefelmougy
genome-sequencing,Phenotype-Gene Association Test for Case-Control Study using NGS-Sequencing Data
User: yun-ching-chen
genome-sequencing,Bayesian Network Model Predicting Personal Phenotypes using Genome-Sequencing Data
User: yun-ching-chen
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