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bazam

A read extraction and realignment tool for next generation sequencing data

bcftools

This is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib

bdvis

Biodiversity data Visualizations in R

bedops

:microscope: BEDOPS: high-performance genomic feature operations

bedserver

A bedfile server (backend for dnaism)

bedtk

A simple toolset for BED files

bedtools-protocols

beepr

The package that sounds as it is called.

benchmarking-tools

Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls

beqtl

Bootstrap eqtl

besst

BESST - scaffolder for genomic assemblies

best-resume-ever

:necktie: :briefcase: Build fast :rocket: and easy multiple beautiful resumes and create your best CV ever! Made with Vue and LESS.

bfc

High-performance error correction for Illumina resequencing data

bigdataclass2018

bigrquery

An interface to Google's bigquery from R.

bigscale

An Analytical Framework for Big-Scale Single Cell Data

bigsi

BItsliced Genomic Signature Index - Efficient indexing and search in very large collections of WGS data

bio-playground

miscellaneous scripts for bioinformatics/genomics that dont merit their own repo.

bio_scripts

Practical, reusable scripts for bioinformatics

bioawk

BWK awk modified for biological data

bioc2017_tcga_gtex_bof

This repository contains a brief outline for a 'Birds-of-Feather' (BOF) session to meet and discuss analyzing publicly available cancer data from TCGA & GTEx

bioc2017bigdataworkshopsession

Tutorial for working with cloud infrastructure and AWS from R

biocworkshops2019

The official repository of the Bioconductor 2019 Conference Workshops :confetti_ball:

biof045-ngs_analysis

Next Generation Sequencing Data Analysis on the Cloud

bioinformatics

BIO200A - Stonehill College - FA2018

bionimbus-pdc_cookbook

Draft version of a quick start guid for Bionimbus/PDC usage

bioruby-samtools

Porting of samtools-ruby to BioRuby. Binder of samtools for ruby, on the top of FFI -from original project-

bioruby-vcf

Smart VCF parser

bird

Big data Regression for predicting DNase I hypersensitivity

birdseed2vcf

Convert birdseed variant file with genotypes to a VCF file