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This is a GWAS pipeline that is intended to be run with biobank size data
Find nearby genes that may be affected by a tagging SNP.
gwasrapidd: an R package to query, download and wrangle GWAS Catalog data
GWAS Pipeline for H3Africa
Scalable genomic data analysis.
New url: https://github.com/biointec/halvade
The CHM1-NA12878 benchmark for single-sample SNP/INDEL calling from WGS Illumina data
haploR: utilities for mining Haploreg and other similar web-based tools
a new algorithm, Holistic Allele-specific Tumor Copy-number Heterogeneity (HATCHet), that infers allele and clone-specific CNAs and WGDs jointly across multiple tumor samples from the same patient, and that leverages the relationships between clones in these samples.
HGNC Comparison of Orthology Predictions (HCOP)
R pkg for Hierarchical Dirichlet Process
Shiny App Example for using rCharts and Highcharts Heat Maps
A Shiny App for Interactive Gene Expression HeatMap Visualisation
heatmap3 is an improved heatmap package. It is completely compatible with the original R function heatmap, and provides some more powerful and convenient features.
Interactive Heat Maps for R Using plotly
A R/shiny web application to browse and compare public RNA-seq / ChIP-seq / CAGE datasets
highly-efficient & lightweight mutation signature matrix aggregation
A simpler way to find your files
Repository containing code used for the analysis described in the PCAWG-11 intra-tumour heterogeneity paper
Identify and correct invalid gene symbols
hgvslib provides functions to parse and compare the equivalency of variant strings described according to Human Genome Variation Society (HGVS) syntax.
A command line tool to highlight terms
A collection of tools for Hi-C data analysis
Fast contact matrix visualization for the web.
R package to investigate differences in mutational signatures
Graph-based alignment (Hierarchical Graph FM index)
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.