Topic: exome-sequencing Goto Github
Some thing interesting about exome-sequencing
Some thing interesting about exome-sequencing
exome-sequencing,Scripts and data processing notes for Russian exome sequencing AF paper
Organization: bioinf
exome-sequencing,Miscellaneous pipelines for genomics computation analysis in a SGE HPC platform.
Organization: bu-isciii
exome-sequencing,Ethnicity Annotation from Whole-Exome and Targeted Sequencing Data
User: cibiobcg
exome-sequencing,
User: cliu32
exome-sequencing,colorectal cancer
User: gari3008ma
exome-sequencing,COverage Analysis Tool have been developed in 2016. It aims to automatically find bad quality regions of coding sequences in a set of sequencing data. It includes a graphical interface.
User: grelot
Home Page: https://sourceforge.net/projects/exam-exome-analysis-and-mining/
exome-sequencing,Easy Copy Number !
Organization: gustaveroussy
exome-sequencing,Note: This is a detailed Intro to this project. A brief users guide can be found at users_guide.md
User: jiatuya
exome-sequencing,Accurate and robust inference of genetic ancestry from cancer-derived molecular data across genomic platforms
Organization: krasnitzlab
Home Page: https://krasnitzlab.github.io/RAIDS/
exome-sequencing,Analysis documentation for research into the variants associated with hyperparathyroidism. Illumina, germline, human, whole exome sequence (WES) data from the CCDHB.
User: leahkemp
exome-sequencing,Leveraging WES short reads for PAN-EXOME creation and analysis.
User: lucianhu
exome-sequencing,Main Repository for my MASTER'S THESIS PROJECT
User: manojmw
exome-sequencing,As part of an overall strategy for improving therapies for childhood cancers, the PPTC seeks to develop models for the types of tumors that will be encountered in early phase clinical testing by establishing patient derived xenografts (PDXs) from high-risk childhood cancers refractory to current standard of care treatments. Genomic profiling of these models is required to enable PPTC investigators to develop robust "responder hypotheses" when drug activity is observed. With funding provided by Alex's Lemonade Stand Foundation, we genomically characterize a major subset of 286 PDX models. We use whole exome sequencing, transcriptome sequencing, and SNPArray to characterize the tumor models. The focus on DNA and RNA sequencing data mirrors the current standard practice in most clinical diagnostics lab that use these technologies to detect the spectrum of targetable mutations, gene amplifications, and gene fusion events relevant to preclinical drug development.
Organization: marislab
exome-sequencing,A fork of the project Excavator2 from sourceforge.
User: matheuscburger
exome-sequencing,The transplot package can be used to make multi-track plots of Next Generation Sequencing (NGS) data for gene transcripts, namely for depth of coverage and for the distribution of variants and protein domains.
User: mframpton
exome-sequencing,Please consider using/contributing to https://github.com/nf-core/sarek
Organization: nf-core
Home Page: http://nf-co.re
exome-sequencing,Example workflow to generate a trio VCF from parental data
User: pasted
exome-sequencing,Selects possible pathogenic variants from an Alamut output
User: pasted
exome-sequencing,All QC, annotation, and analyses for IBD exomes
Organization: rivas-lab
exome-sequencing,Scripts used on a cluster that demonstrate vcf file manipulation and preparation.
User: sdhutchins
exome-sequencing,Reference Genome based Exon Phylogeny Pipeline
User: starsareintherose
Home Page: https://git.malacology.net/malacology/RGBEPP
exome-sequencing,Pipeline for Somatic Variant Calling with WES and WGS data
User: tjbencomo
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