Topic: entrez Goto Github
Some thing interesting about entrez
Some thing interesting about entrez
entrez,Python class project in collab with @heloint and @anivalle. Using Entrez, Seq.io, regex, pandas
User: androidbeingx
entrez,Materials used for introductory classes using Julia for statistics, biomedical queries and plotting
Organization: bcbi
entrez,This is a Kaggle competition sponsored by Memorial Sloan Kettering Cancer Center. This competition is the first step in personalized medicine to determine oncogenicity of a tumor. Algorithm using sparse words to predict gene mutations effect on protein function.
User: bkapsalis
entrez,This script iterates over an excel file with Genbank accession numbers. It creates individual fasta files with customized deflines for every valid accession number. It also creates a combined fasta file and .txt file with every valid accession number.
User: chadr1989
entrez,Python scripts for searching Pubmed using Biopython and working with eponymous terms
User: cornish
entrez,Modification of the Biopython Entrez module to be compatible with AWS Lambda.
User: cparmet
entrez,Extract figures and figure captions from PMC open access papers
User: etowahadams
entrez,Fetch taxonomic information from Entrez using a list of TaxIDs and visualize user-selected taxonomic ranks with SankeyMATIC.
User: justin-tpb
entrez,Retrieve PubMed articles, text-mining annotations, or molecular data from >35 Entrez databases via easy to use Python package - built on top of Entrez E-utilities API.
User: krassowski
Home Page: https://easy-entrez.readthedocs.io/en/latest/
entrez,Sequencing data preprocessing
User: metamaden
entrez,Repository for supplementary materials for study on detection of Brno loanvirus in Southern Russia
Organization: popoviilab
entrez,Este é um repositório de um pipeline de dados, uma ferramenta automatizada e robusta projetada para efetuar a estração de sequências genéticas utilizando a API Entrez do GenBank. Este pipeline é o resultado de um esforço contínuo para facilitar o acesso e a manipulação de dados genéticos de importância global, com foco atual no vírus Chikungunya.
User: rafaelqsantos-rqs
entrez,fetche sequences in ncbi
User: rendrick27
Home Page: https://stuntspt.gitlab.io/ASB/classes/class_05/index.html#/
entrez,Brings bulk and pseudobulk transcriptomics to the tidyverse
User: stemangiola
entrez,Query entrez databases using R, returns document summaries as data frame. Wrapper function around esearch and esummary etools.
User: tpall
entrez,A VSM-dictionary that uses NCBI's E-utilities API to connect with the PubMed database
Organization: unibiodicts
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