Topic: diffusion-mri Goto Github
Some thing interesting about diffusion-mri
Some thing interesting about diffusion-mri
diffusion-mri,Code for paper "Diffusion Deep Learning for Brain Age Prediction and Longitudinal Tracking in Children through Adulthood
Organization: aim-kannlab
diffusion-mri,The open source toolbox for reproducible diffusion MRI-based microstructure estimation
Organization: athenaepi
diffusion-mri,Nipype and tractography!
User: axiezai
Home Page: https://axiezai.github.io/pipetography/
diffusion-mri,Generate subject connectomes from raw BIDS data & perform inter-subject connection density normalisation, using the MRtrix3 software package.
Organization: bids-apps
Home Page: http://www.mrtrix.org/
diffusion-mri,BIDS app for NeuroData's MRI to Graphs pipeline
Organization: bids-apps
Home Page: http://m2g.io
diffusion-mri,Method for encoding brain connectomes in multidimensional arrays (tensors).
Organization: brain-life
Home Page: https://github.com/brain-life/encode
diffusion-mri,A repository for the Quantitative Imaging Toolkit (QIT)
User: cabeen
Home Page: https://cabeen.io/qitwiki
diffusion-mri,Introduction to dMRI
Organization: carpentries-incubator
Home Page: https://carpentries-incubator.github.io/SDC-BIDS-dMRI/
diffusion-mri,Anomaly detection framework for Tractometry
User: chamberm
diffusion-mri,Scripts for MRI preprocessing
User: cwatson
diffusion-mri,:brain: DTI-NODDI: Create NODDI maps from DTI (either "FA and MD" or "L1, L2, and L3")
User: dicemt
diffusion-mri,DMRITool is an open souce toolbox for reconstruction, processing and visualization of diffusion MRI data (DWI, tensor, ODF,EAP, fibers etc.).
Organization: diffusionmritool
Home Page: https://diffusionmritool.github.io
diffusion-mri,DIPY is the paragon 3D/4D+ imaging library in Python. Contains generic methods for spatial normalization, signal processing, machine learning, statistical analysis and visualization of medical images. Additionally, it contains specialized methods for computational anatomy including diffusion, perfusion and structural imaging.
Organization: dipy
Home Page: https://dipy.org
diffusion-mri,Deconvolution algorithms for diffusion MRI
User: ejcanalesr
diffusion-mri,Please use the new version of LiFE: www.github.com/brain-life/encode
User: francopestilli
Home Page: http://francopestilli.github.io/life/
diffusion-mri,TractLearn is a Manifold Learning Toolbox for precision medicine. The first application is for Diffusion-Weighted MRI quantitative analysis.
Organization: geodaisics
diffusion-mri,ISBI 2023 - A Registration- and Uncertainty-based Framework for White Matter Tract Segmentation with Only One Annotated Subject
User: haoxu0507
Home Page: https://haoxu0507.github.io/publications/isbi2023_01/
diffusion-mri,The Monte Carlo Diffusion and Collision simulator (MC/DC), is a C++ open-source Diffusion-Weighted Magnetic Resonance Imaging (DW-MRI) Monte Carlo Simulator.
User: jonhrafe
Home Page: https://jonhrafe.github.io/MCDC_Simulator_public/
diffusion-mri,NOW - Numerical Optimization of gradient Waveforms
User: jsjol
diffusion-mri,Koma is a Pulseq-compatible framework to efficiently simulate Magnetic Resonance Imaging (MRI) acquisitions. The main focus of this package is to simulate general scenarios that could arise in pulse sequence development.
Organization: juliahealth
Home Page: https://JuliaHealth.github.io/KomaMRI.jl
diffusion-mri,Massively parallel Monte Carlo diffusion MR simulator written in Python.
User: kerkelae
Home Page: https://disimpy.readthedocs.io/
diffusion-mri,Quantitative MRI toolbox in Python
User: lamyj
Home Page: https://erwin.readthedocs.io/
diffusion-mri,Simulate realistic diffusion-weighted MR data
User: marksgraham
diffusion-mri,Convolutional-recurrent neural networks approximate diffusion tractography from T1-weighted MRI and associated anatomical context
Organization: masilab
Home Page: https://my.vanderbilt.edu/masi
diffusion-mri,Distortion correction of diffusion weighted MRI without reverse phase-encoding scans or field-maps
Organization: masilab
Home Page: https://my.vanderbilt.edu/masi
diffusion-mri,Peak width of Skeletonized Mean Diffusivity (PSMD)
Organization: miac-research
Home Page: https://www.psmd-marker.com
diffusion-mri,MITK Diffusion - Official part of the Medical Imaging Interaction Toolkit
Organization: mic-dkfz
Home Page: http://mitk.org/wiki/MITK
diffusion-mri,micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read The Docs documentation below
Organization: mica-mni
Home Page: http://micapipe.readthedocs.io
diffusion-mri,A hands-free DTI, DKI, FBI and FBWM preprocessing pipeline. Information on algorithms and preprocessing steps are available at https://www.biorxiv.org/content/10.1101/2021.10.20.465189v1 A video tutorial on PyDesigner and its usage is now available at https://www.youtube.com/watch?v=mChQFuQqX3k
Organization: muscbridge
Home Page: https://pydesigner.readthedocs.io/en/latest/
diffusion-mri,dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.
Organization: nipreps
Home Page: https://www.nipreps.org/dmriprep
diffusion-mri,Open-source eddy-current and head-motion correction for dMRI.
Organization: nipreps
Home Page: https://nipreps.org/eddymotion
diffusion-mri,DTIPrep performs a "Study-specific Protocol" based automatic pipeline for DWI/DTI quality control and preparation
Organization: niraluser
Home Page: http://www.nitrc.org/projects/dtiprep
diffusion-mri,DTIProcess is a DTI processing and analysis toolkit developed in UNC and University of Utah
Organization: niraluser
Home Page: http://www.nitrc.org/projects/dtiprocess
diffusion-mri,Toolbox for parameter estimation of the Standard Model of diffusion in white matter
Organization: nyu-diffusionmri
diffusion-mri,This repository contains the code regarding our publication: Improved unsupervised physics-informed deep learning for intravoxel-incoherent motion modeling and evaluation in pancreatic cancer patients
User: oliverchampion
diffusion-mri,Preprocessing and reconstruction of diffusion MRI
Organization: pennlinc
Home Page: http://qsiprep.readthedocs.io
diffusion-mri,FOD-Net: A Deep Learning Method for Fiber Orientation Distribution Angular Super Resolution
User: ruizengalways
diffusion-mri,Automated characterization of noise distributions in diffusion MRI data
User: samuelstjean
diffusion-mri,The reference implementation for the Non Local Spatial and Angular Matching (NLSAM) denoising algorithm for diffusion MRI
User: samuelstjean
diffusion-mri,Tractography learning
Organization: scil-vital
Home Page: https://tractolearn.readthedocs.io/en/latest/
diffusion-mri,A real-time diffusion MRI viewer for Linux and Windows using OpenGL 4.6.
Organization: scilus
diffusion-mri,Patch2Self Denoising - NeurIPS 2020 Spotlight Presentation
User: shreyasfadnavis
diffusion-mri,ORG Fiber Clustering White Matter Atlas
Organization: slicerdmri
diffusion-mri,Diffusion MRI analysis and visualization in 3D Slicer open source medical imaging platform.
Organization: slicerdmri
Home Page: http://dmri.slicer.org
diffusion-mri,White matter tractography clustering and more...
Organization: slicerdmri
Home Page: https://dmri.slicer.org/whitematteranalysis/
diffusion-mri,[ICLR2023] Official repository of DDM2: Self-Supervised Diffusion MRI Denoising with Generative Diffusion Models
Organization: stanfordmimi
diffusion-mri,No Longer Maintained
Organization: unfmontreal
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