Topic: anndata Goto Github
Some thing interesting about anndata
Some thing interesting about anndata
anndata,A guide to using a Seurat object in conjunction with RNA Velocity
User: basilkhuder
anndata,MiCV is a python dash-based web-application that enables researchers to upload raw scRNA-seq data and perform filtering, analysis, and manual annotation.
Organization: cai-lab-at-university-of-michigan
Home Page: https://micv.works/
anndata,Awesome GRN enhanced AnnData toolkit
Organization: cantinilab
Home Page: https://cantinilab.github.io/GRnnData/
anndata,A Python implementation of the tximport package for gene count estimation.
Organization: complextissue
Home Page: https://pytximport.readthedocs.io
anndata,MuData-compatible storage for bioconductor's MultiAssayExperiment
User: ilia-kats
Home Page: https://ilia-kats.github.io/MuData/
anndata,Bring your single-cell data to life
Organization: lilab-bcb
Home Page: https://cirrocumulus.readthedocs.io/
anndata,TeeSnee is an algorithm designed to take high-dimensional gene expression data and represent it in low-dimensional space.
User: m1ma0314
anndata,Download and Convert METASPACE datasets to common formats such as AnnData or SpatialData
Organization: metaspace2020
Home Page: https://metaspace2020.github.io/metaspace-converter/
anndata,Fetch and format data matrices from AnnData
User: mvinyard
Home Page: https://michael-vinyard.gitbook.io/anndataquery/
anndata,AnnData-compatible wrapper of Spotify's annoy library.
User: mvinyard
anndata,Cell approximate nearest neighbors (ANN)
User: mvinyard
anndata,Neighbor graphs for single-cell data (AnnData)
User: mvinyard
anndata,Plotting assistant and resources
User: mvinyard
Home Page: https://pypi.org/project/cellplots/
anndata,Create PyTorch Datasets from AnnData
User: mvinyard
Home Page: https://torch-adata.readthedocs.io/en/latest/index.html
anndata,Michael Vinyard's utilities
User: mvinyard
anndata,pseudobulking on an AnnData object
User: noamteyssier
anndata,Multimodal datasets, in MuData format
Organization: pmbio
Home Page: https://gtca.github.io/muon
anndata,.h5mu files interface for Seurat
Organization: pmbio
Home Page: https://pmbio.github.io/MuDataSeurat/
anndata,Annotated data.
Organization: scverse
Home Page: http://anndata.readthedocs.io
anndata,Multimodal Data (.h5mu) implementation for Python
Organization: scverse
Home Page: https://mudata.rtfd.io
anndata,muon is a multimodal omics Python framework
Organization: scverse
Home Page: https://muon.scverse.org/
anndata,Muon for Julia
Organization: scverse
Home Page: https://scverse.github.io/Muon.jl/dev
anndata,Rapids_singlecell: A GPU-accelerated tool for scRNA analysis. Offers seamless scverse compatibility for efficient single-cell data processing and analysis.
Organization: scverse
Home Page: https://rapids-singlecell.readthedocs.io/
anndata,Single-cell analysis in Python. Scales to >1M cells.
Organization: scverse
Home Page: https://scanpy.readthedocs.io
anndata,
Organization: theislab
Home Page: https://geome.readthedocs.io/en/latest/
anndata,anndata with trees
Organization: yoseflab
Home Page: https://treedata.readthedocs.io
anndata,An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.
User: zhanghao-njmu
Home Page: https://zhanghao-njmu.github.io/SCP/
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.