zhanghao-njmu Goto Github PK

alphafold

Open source code for AlphaFold.

awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

bio-workstation

cellchat

R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data

chatgpt

Interface to ChatGPT from R

circrna_orf_predict

cloudreve

🌩支持多家云存储的云盘系统 (A project helps you build your own cloud in minutes)

clusterprofiler

:bar_chart: A universal enrichment tool for interpreting omics data

corto

corto (Correlation Tool): an R package to generate correlation-based DPI networks

cv

My CV built using RMarkdown and the pagedown package.

dropest

Pipeline for initial analysis of droplet-based single-cell RNA-seq data

dropestr

Preprocessing of Droplet-based Single-Cell RNA-seq Data

dropkick

Automated cell filtering for single-cell RNA sequencing data

ggplot2

An implementation of the Grammar of Graphics in R

ggsankey

Make sankey, alluvial and sankey bump plots in ggplot

hgpsc-analysis-code

hGPSC-analysis-code

mgi_mp_capture

multiqc

Aggregate results from bioinformatics analyses across many samples into a single report.

ngsmodule

A flexible, automation and pragmatic workflow tool to process the NGS data.

openai

An R package-wrapper around OpenAI API

openapi

openapi provides an easy-to-use interface for interacting with the OpenAI API in R, allowing users to generate responses to natural language prompts and process them for various tasks.

rsshub

🍰 Everything is RSSible

scnca

scp

An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.

seurat

R toolkit for single cell genomics

seurat-data

Dataset distribution for Seurat

seurat-disk

Interfaces for HDF5-based Single Cell File Formats

seurat-wrappers

Community-provided extensions to Seurat

simspec

Calculation of Reference/Cluster Similarity Spectrum (RSS/CSS)

system_maintenance