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bavaria

Batch-adversarial variational auto-encoder (BAVARIA) for simultaneous dimensionality reduction and integration of single-cell ATAC-seq datasets

bayesian_methods_for-protenomics

bbmap

bbmeth

BBMeth: An R package for fitting methylation data with a beta-binomial model

bbplot

R package that helps create and export ggplot2 charts in the style used by the BBC News data team

bc-and-m6a

beat

This is a read-only mirror of the Bioconductor SVN repository. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/BEAT.html Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=BEAT.

bedannotation

bedops

:microscope: BEDOPS: high-performance genomic feature operations

bgeedb

an R package for retrieval of curated expression datasets and for gene list expression localization enrichment tests, Komljenovic et al. f1000Research

bgwas

R package to perform Bayesian Genome-Wide Association Studies

bi-cytok

Modeling bispecific cytokine fusions.

bigmhc

Deep Neural Networks Predict MHC-I Epitope Presentation and Transfer Learn Neoepitope Immunogenicity

bigsnpr

:exclamation: This is a read-only mirror of the CRAN R package repository. bigsnpr — Analysis of Massive SNP Arrays. Homepage: https://privefl.github.io/bigsnpr Report bugs for this package: https://github.com/privefl/bigsnpr/issues

bioasqdatasource

biobert-pretrained

BioBERT: a pre-trained biomedical language representation model for biomedical text mining

biobtree

A bioinformatics tool to search and map identifiers and special keywords

biocluster

Tutorial on building a computing cluster for bioinformatics

bioconda_testing

Testing the distribution of Bioconductor packages through Conda / Bioconda infrastructure

bioinfo-scripts

Assorted scripts in Perl, Bash, R and whatsoever directly from a bioinformaticians scripts/ folder

bioinformatics-cafe

Unsorted scripts for bioinformatics. Former google.code bioinformatics-misc

biojs.annotator

Javascript based component for highlighting text-mined annotations of different semantic types in a full text article identified by a PMCID

biomarkers

Genetics of blood and urine biomarkers in the UK Biobank

biomedical-knowledge-mining-book

:books: Biomedical knowledge mining using GOSemSim and clusterProfiler

bioperl-live

Core BioPerl 1.x code

biopharma.github.io

BioPharma @ Computational Biology

biosentvec

BioWordVec & BioSentVec: pre-trained embeddings for biomedical words and sentences

biostar-central

Biostar Q&A

biostars

biotech-stock-scrape

A program that scrapes news and price data for biotech stocks seeking FDA approval, built using Python and AutoHotkey