Name: Hiep C. Nguyen, M.D., Ph.D.
Type: User
Company: Dana-Farber Cancer Institute - Harvard Medical School
Bio: Research Fellow -
Dana-Farber Cancer Institute -
Harvard Medical School
Twitter: DrNguyenhiep
Location: Boston, MA, US
Blog: https://scholar.google.com/citations?user=1V91zsAAAAAJ&hl=en&oi=ao
Hiep C. Nguyen, M.D., Ph.D.'s Projects
Course website for Genomic Data Visualization 2022
Course website for Genomic Data Visualization 2023
Builds a PEP from SRA or GEO accessions
Workflows for analyzing data with the GeomxTools package and subsequent GeoMx related packages
The gfoRmula package implements the parametric g-formula in R. The parametric g-formula (Robins, 1986) uses longitudinal data with time-varying treatments and confounders to estimate the risk or mean of an outcome under hypothetical treatment strategies specified by the user.
ggplot2: elegant graphics for data analysis
This repository contains information about ongoing analysis performed by GIAB
This is repo for the code used in Gift-of-Life paper from Pasca lab
glue for genomics and transcriptomics
Glue front-end for the Jupyter ecosystem
Graph Machine Learning, published by Packt
Standalone GRIDSS/PURPLE/LINX pipeline
H3A variant calling pipeline
Fast, sensitive and accurate integration of single-cell data with Harmony
Reproduce analyses in Harmony Manuscript
This repository contains HCA Benchmarking codes
Histopathology Image Analysis
Hierarchical Image Pyramid Transformer - CVPR 2022 (Oral)
:beer::microscope: Bioinformatics formulae for the Homebrew package manager (macOS and Linux)
🍻 Default formulae for the missing package manager for macOS
Repository for training materials for the HSMA / PSMA Programme
A record of the analysis pipelines used to create the HTAPP data
single cell analysis of treatment naive and treated human PDAC
Code for the analyses in the human reference interactome paper.