Name: Hiep C. Nguyen, M.D., Ph.D.
Type: User
Company: Dana-Farber Cancer Institute - Harvard Medical School
Bio: Research Fellow in Medicine ||
Dana-Farber Cancer Institute ||
Harvard Medical School
Twitter: DrNguyenhiep
Location: Boston, MA, US
Blog: https://scholar.google.com/citations?user=1V91zsAAAAAJ&hl=en&oi=ao
Hiep C. Nguyen, M.D., Ph.D.'s Projects
Code to investigate hallmark cytokine transcripts in ncISDs
Process and analyze spatial transcriptomic data for cHCC CCA reclassification project
A toolkit of spatial transcriptomic analysis.
Uncover spatially informed shared variations underlying single-cell spatial transcriptomics with STew.
code for data processing and visualisation associated with the stromal subclasses manuscript
Easily install and load packages from the tidyverse
TIPC: Tumor-Immune Partitioning and Clustering
The Tomographer package implements the mathematical spatial image reconstruction of any set of read counts as described in the following article: https://www.nature.com/articles/s41587-021-00879-7
Materials for short, half-day workshops
Tutorials in datamining and bioinformatics
Variant Calling Pipeline Using GATK4 and Nextflow
Signature Analysis and Visualization for Single-Cell RNA-seq
The Zhang Lab Manual: Lab principles and activities, Handbook for reproducible computational research, Learning resources, Expectations and achievements, etc