pythseq Goto Github PK
Name: pythseq
Type: User
Company: https://www.cnrs.fr/fr
Bio: IR-CNRS (Bioinformatician)
Twitter: pythseq
Location: France
Name: pythseq
Type: User
Company: https://www.cnrs.fr/fr
Bio: IR-CNRS (Bioinformatician)
Twitter: pythseq
Location: France
Shiny apps for teaching Population Genetics
a slide deck presentation tool written in pure bash
SHallow shOtGUN profiler
ShortStack: Comprehensive annotation and quantification of small RNA genes
A (file-) journal for your shell
Stupid-simple automation for everyone
A fast whole-genome aligner based on de Bruijn graphs
A tool to graphically visualize SIMD code
Simka and SimkaMin are comparative metagenomics method dedicated to NGS datasets.
Simulation-based Power Estimation for sequencing studies of Low-prevalence conditions
This project is work in progress! https://www.sc-best-practices.org
Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"
Novelty-inclusive microbial community profiling of shotgun metagenomes
Tools for single-cell data processing
Fast, robust ANI and aligned fraction for metagenomic genomes and contigs.
SKESA assembler
C++ Implementations of sketch data structures with SIMD Parallelism, including Python bindings
Real-time lineage hashing and genotyping of bacterial pathogens from uncorrected nanopore reads :closed_umbrella:
GC Skew Test for Bacterial Genomes
Exploring dimension-reduced embeddings
variant expressions, annotation, and filtering for great good.
Slurm-Mail is a drop in replacement for Slurm's e-mails to give users much more information about their jobs compared to the standard Slurm e-mails.
structural variant calling and genotyping with existing tools, but, smoothly.
Inference of ploidy and heterozygosity structure using whole genome sequencing data
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.