pythseq Goto Github PK

hundo

:bar_chart: Snakemake-based amplicon processing protocol for 16S and ITS sequences.

hvgi_contralateral_effect

Ancillary Follow up Study of HVGI

hybracter

Hybrid (and long-only) bacterial assembly pipeline for many isolates using Snakemake and Snaketool

hyper

An R Package for Geneset Enrichment Workflows

hyperminhash

HyperMinHash: Bringing intersections to HyperLogLog

hypertools

A python toolbox for gaining geometric insights into high-dimensional data

hyphy

HyPhy: Hypothesis testing using Phylogenies

hyphy-analyses

HyPhy standalone analyses

i5k.github.io

i5k Website

icas

Fork of the official iCAS pipeline by the Wellcome Trust Sanger Institute

ideel

Indels are not ideal - quick test for interrupted ORFs in bacterial/microbial genomes

ideogram

Chromosome visualization with D3.js

idep

Integrated Differential Expression and Pathway analysis

idseq-web

Infectious Disease Sequencing Platform

iggsearch

Metagenomic species profiling with enhanced coverage of the human gut microbiome

iham

Widget to visualise the evolutionary history of gene families

iliad

ILIAD: A suite of automated Snakemake workflows for processing genomic data for downstream applications

illumina_vs_nan_for_phages

imap

imgmc

Repository of the integrated mouse gut metagenomic catalog

in-depth-ngs-data-analysis-course

Materials for 12-day course on analyzing RNA-Seq, ChIP-Seq and variant calling data.

inferring-and-visualizing-rna-velocity-in-bulk-rna-seq

Analysis steps to calculate RNA Velocity in Bulk RNA-Seq samples. Step by Step Guide.

info8010-deep-learning

Lectures for INFO8010 - Deep Learning, ULiège

instrain

Bioinformatics program inStrain

intermine-ws-python-docs

Tutorials for the InterMine Python web client

interproscan

intervaltree

A mutable, self-balancing interval tree. Queries may be by point, by range overlap, or by range containment.

intro-to-chipseq

Intro to ChIPseq using HPC

intro-to-r

intro-to-r-with-dge