mscampbell / genome_annotation

These are scripts that I use frequently in genome annotation projects. Some of them have evolved awkwardly so the code is difficult to follw

Genome_annotation

This repository contains some of the scripts that I use frequently in annotation projects. They vary in complexity and in how well they are written. Some of them are from pretty early on in my learning to program.

genome_annotation's Issues

Illegal division by zero

I am trying to compare annotations with some gff file not created by maker, but ever time run the AED script with non-Maker annotations i get the following error:

Illegal division by zero at /scratch/users/juan/biotools/AED_cdf_generator.pl line 49.

Any ideas why this happens?

Thanks!

0s for all the bins

Have you ever encountered 0 values for every AED bin from running AED_cdf_generator.pl (except for the last)? Just to note my previous iteration of Maker had a 92.6 for the 0.5 AED bin.

Do you know why that would be? or what that would mean?