Name: Daren Card
Type: User
Company: Harvard University
Twitter: darencard
Location: Cambridge, MA
Blog: www.darencard.net
Ph.D., Quantitative Biology (Evolutionary Biology, Genetics, Genomics, & Bioinformatics) from University of Texas, Arlington.
Main academic interest: Convergent, adaptive evolution of vertebrates using cutting-edge genomics approaches.
Currently a postdoctoral fellow in the Edwards lab at Harvard University.
Previously a graduate student studying in the Castoe lab at UT-Arlington.
Genome Sequencing, Assembly, & Annotation, RAD-seq, RNA-seq, ATAC-seq, Hi-C, and more!
2016-01-30-uta
2016-12-09-ucsf_python
2017-02-04-uta
2017-05-04-suny-upstate
2019-snakemake-harvard-informatics-nanocourse
Intro to workflows for efficient automated data analysis, using snakemake.
augustustraining
An automated pipeline to train Augustus using genome and transcriptome assemblies
awesome-badges
😎 A curated list of GitHub badges for your next project
bandage
a Bioinformatics Application for Navigating De novo Assembly Graphs Easily
begfe
BEGFE: Bayesian Estimation for Gene Family Evolution
best_slurm_partition
bird_genome_size
boacon
Genomic and annotation data for Boa constrictor boaCon1 genome
bx-python
Tools for manipulating biological data, particularly multiple sequence alignments
card_etal_pythonadaptation
Scripts used for data analysis in Card et al. (in review).
carpentry_jetstream_setup
Scripts to facilitate SWC/DC instance setup in Jetstream
cdhit
Automatically exported from code.google.com/p/cdhit
chicken
messy chicken dataset
contigannotator
Python scripts for annotating contigs (e.g., de novo transcriptome).
darencard
GitHub profile README
darencard.github.io
Daren Card's professional website
datacarpentry.github.io
Website repo
dataviz
A book covering the fundamentals of data visualization
dc_2016_04
Data Carpentry materials for Jackson Labs workshop
droboports.github.io
DroboPorts website
evolution-2019-phylogenetic-methods-workshop
This repo contains tutorials and data for the workshop on phylogenetic methods being delivered at the 2019 Evolution conference in Providence, Rhode Island
friggeri-cv-a4
A4 paper format version of the fancy Friggeri CV LaTex template
genome_annotation
These are scripts that I use frequently in genome annotation projects. Some of them have evolved awkwardly so the code is difficult to follw
genomeannotation
Various scripts that I have created that are useful for genome annotation (repeats & proteins)
grass
Genomic Repeat Analysis using Sample Sequencing
imaging
Using Arduino to integrate a camera and microtome and perform serial episcopic imaging
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
