View Code? Open in Web Editor
NEW
Working Demo on 16S rDNA V3-V4 amplicon sequencing analysis using dada2, phyloseq, LEfSe, picrust2 and other tools. Visit repo website for HTML output
Home Page: https://ycl6.github.io/16S-Demo/
License: GNU General Public License v3.0
16s-demo's Introduction
Welcome to my GitHub profile!
- Create a GitHub Pages site for your repository
- Create stacked violin plots from
Seurat
, SingleCellExperiment
and data.frame
objects
- Gallery showcasing Pandoc syntax highlight styles before and after version 2.11
- Short examples of using R in data analysis and visualisation
- National survey
- Deaths registered monthly in England and Wales
- COVID-19 Vaccination Statistics in England
- Gene expression
- Visualise differential expression analysis results with MA plot
- Normalisation of bulk RNA-seq counts
- Plot ligand-receptor expression on UMAP and t-SNE projection
- Others
- Visualise interaction between 2 variables with parallel sets diagrams
- Testing of the Spatial Image Analysis of Tissues (SPIAT) R package
16s-demo's People
Contributors
Watchers