Topic: structure-prediction Goto Github
Some thing interesting about structure-prediction
Some thing interesting about structure-prediction
structure-prediction,Predict the whole sequence and 3D structure of masked protein sequences with ESM by @evolutionaryscale
User: astrabert
structure-prediction,Your open-source alternative to AlphaFold3🚀
User: astrabert
structure-prediction,Visualize the inner workings of RNA bioinformatics algorithms for structure prediction, interaction prediction and sequence alignment.
Organization: backofenlab
Home Page: http://rna.informatik.uni-freiburg.de/Teaching/
structure-prediction,Searching proteins against a database of embeddings
User: biovino1
structure-prediction,Data and code for the manuscript "Assessing the utility of CASP14 models for Molecular Replacement: https://doi.org/10.22541/au.162412334.48194370/v1
User: clacri
structure-prediction,Evolutionary couplings from protein and RNA sequence alignments
Organization: debbiemarkslab
Home Page: http://evcouplings.org
structure-prediction,[ACL'23 main] DICE: Data-Efficient Clinical Event Extraction with Generative Models
User: derekmma
Home Page: https://derek.ma/DICE
structure-prediction,Recurrent neural network implementations for protein secondary structure prediction and language models
User: dillondaudert
structure-prediction,A pipeline for AlphaFold2-Multimer on a SLURM compute cluster with visualization in ChimeraX.
User: evalkov
structure-prediction,Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation
Organization: genentech
Home Page: https://www.biorxiv.org/content/10.1101/2022.10.07.511322v1
structure-prediction,nucleic acid folding
Organization: lattice-automation
structure-prediction,Protein Secondary Structure predictor using Convolutional Neural Networks
User: lucaangioloni
structure-prediction,Prospr is a universal toolbox for protein structure prediction within the HP-model. The Python package is based on a C++ core, which gives Prospr its high performance. The C++ core is made available as a separate zip file to facilitate high-performance computing applications. The package comes with many prediction algorithms and datasets to use.
User: okkevaneck
structure-prediction,A deep learning method that identifies improved protein conformational states in trajectory data from refinement simulations
User: oneangstrom
structure-prediction,PSP is a python toolkit for predicting atomic-level structural models for a range of polymer geometries.
Organization: ramprasad-group
structure-prediction,Recommendation-based Basin-Hopping for cation ordering optimization
User: rouyang2017
structure-prediction,An implementation of a genetic algorithm in Python for predicting equilibrium crystal structures for a given potential. The potential implemented here is the Daoud-Cotton model, but this can be easily changed.
User: singularitty
structure-prediction,Making Protein folding accessible to all!
User: sokrypton
structure-prediction,spdkit: Structure Predication Development Kit
Organization: spdkit
structure-prediction,A set of libraries for aligning, profiling, and predicting the structure of proteins
User: stanisadmin
Home Page: https://stanisadmin.github.io/PyProt/
structure-prediction,An implementation of the DeepMind's AlphaFold based on PyTorch for research
User: urinx
structure-prediction,deep learning based prediction of structures and functional groups from MS/MS spectra
User: volvox292
structure-prediction,Active Imitation Learing with Noisy Guidance
User: xkianteb
structure-prediction,Deep neural models for core NLP tasks (Pytorch version)
User: xuezhemax
structure-prediction,Python bindings for the `buildcell` program for Ab Initio Random Structure Searching (AIRSS)
User: zhubonan
structure-prediction,Computing descriptors for AIRSS style SHELX files.
User: zhubonan
structure-prediction,[EMNLP 2022] Generative Knowledge Graph Construction: A Review
Organization: zjunlp
structure-prediction,[ACL 2023] SPEECH: Structured Prediction with Energy-Based Event-Centric Hyperspheres
Organization: zjunlp
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