Topic: microbiome-data Goto Github
Some thing interesting about microbiome-data
Some thing interesting about microbiome-data
microbiome-data,short-read amplicon data visualization suite
User: alexumbach
microbiome-data,Track, Analyze, Visualize: Unravel Your Microbiome's Temporal Pattern with MicrobiomeStat
User: cafferychen777
Home Page: https://www.microbiomestat.wiki/
microbiome-data,A Shiny interface for the MicrobiomeStat R package, designed to facilitate analysis and visualization of microbiome data.
User: cafferychen777
Home Page: https://cafferyyang.shinyapps.io/MicrobiomeStat_Shiny/
microbiome-data,MicrobiomeStat Tutorial Repository: This is a comprehensive resource for learning how to use the MicrobiomeStat package. It provides a step-by-step guide to effectively analyze complex microbiome data.
User: cafferychen777
Home Page: https://www.microbiomestat.wiki/
microbiome-data,A database for storing and analyzing omics data
Organization: clemente-lab
Home Page: https://mmeds.org
microbiome-data,This repository contains R scripts for data analyses and visualization.
User: dixit-kunal
microbiome-data,Analyzing microbiome data from Gigante, Barro Colorado, Panama. Part of an Undergraduate Thesis (defended on May 13th, 2022).
User: gromulus-romulus
microbiome-data,I performed PCA and t-SNE on the microbiome dataset and visualized the data in 2D space. I also report what I learned from the PCA and t-SNE analyses.
User: hardikasnani
microbiome-data,A microbiome knowledge graph was constructed using data from the Human Microbiome Project, IBD cohort. This project was done as a part of my dissertation for my MSc in Health Data Science with The University of Manchester. It was done as an internship with Zifo RnD Solutions, a leading Scientific Informatics Company.
User: harini1111
microbiome-data,Machine learning for microbiome data
User: jtremblay
microbiome-data,Python utility to generate distance matrices, perform PCoAs and generate taxonomic summaries using simple tab-separated feature tables.
User: jtremblay
Home Page: https://github.com/jtremblay/microbiomeutils
microbiome-data,This repo contains the R microshades package, which contains a color blind accessible color palette with 30 unique colors and functions for applying these colors to microbiome data.
User: karstenslab
Home Page: https://karstenslab.github.io/microshades
microbiome-data,GDmicro - Use GCN and Deep adaptation network to classify host disease status based on human gut microbiome data.
User: liaoherui
Home Page: https://academic.oup.com/bioinformatics/article/39/12/btad747/7470738
microbiome-data,Exploring different database implementations for clinical microbiome data
User: mariopasc
microbiome-data,Microbiome Diversity Inspector - A platform for visual analysis of microbiome data.
Organization: microbiome-diversity-inspector
Home Page: https://microbiome-diversity-inspector.github.io/Microbiome-Diversity-Inspector/
microbiome-data,A list of R environment based tools for microbiome data exploration, statistical analysis and visualization
User: microsud
Home Page: https://microsud.github.io/Tools-Microbiome-Analysis/
microbiome-data,Convert the American Gut Microbiome Project phenotype .xml files into a single .csv file.
User: sacci
microbiome-data,A project to evaluate the differences in bacterial association networks from rainforest and converted pasturelands in the Colombian Amazon region using CCLasso and SPRING inference methods
User: sayalaruano
microbiome-data,
User: seandavi
Home Page: https://seandavi.github.io/MicroBioMap/
microbiome-data,Repository for the data associated with my masters thesis
User: serre2k
microbiome-data,A Bayesian model for the differential abundance analysis of microbiome sequencing data
User: shuangj00
microbiome-data,Network construction, analysis, and comparison for microbial compositional data
User: stefpeschel
microbiome-data,The scripts contained in this repository relate directly to the work conducted by the Tree Root Microbiome Project (TRMP) led by Dr Steve Wakelin.
User: tomc-93
microbiome-data,Visualization of world-class repeated measures microbiome data from the lungs of children with Cystic Fibrosis, with wide-ranging applications to other longitudinal microbiome data.
User: v-talbot
microbiome-data,Code to reproduce the analyses from the paper "Benchmarking microbiome transformations favors experimental quantitative approaches to address compositionality and sampling depth biases"
User: vllorens
microbiome-data,Analyses in R and Python Using curatedMetagenomicData
Organization: waldronlab
Home Page: https://waldronlab.io/curatedMetagenomicDataAnalyses/
microbiome-data,:microbe: A comprehensive R package for deep mining microbiome
Organization: yulab-smu
Home Page: https://www.sciencedirect.com/science/article/pii/S2666675823000164
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