Topic: medical-image-analysis Goto Github

👇 Here are 406 public repositories matching this topic...

ainimal / aini_modules
medical-image-analysis,A PyTorch Computer Vision (CV) module library for building n-D networks flexibly ~
Organization: ainimal
image medical-image-analysis pretrained-models pytorch video 3d-cnn-model 3d-densenet 3d-models 3d-resnet attention-mechanism

anjanatiha / pneumonia-detection-from-chest-x-ray-images-with-deep-learning
medical-image-analysis,Detecting Pneumonia in Chest X-ray Images using Convolutional Neural Network and Pretrained Models
User: anjanatiha
image-recognition image-detection convolutional-neural-networks keras keras-tensorflow tensorflow inception inceptionv3 imagenet deep-convolutional-networks

arnab39 / fewshot_gan-unet3d
medical-image-analysis,Tensorflow implementation of our paper: Few-shot 3D Multi-modal Medical Image Segmentation using Generative Adversarial Learning
User: arnab39
3d-gan brain-mri convolutional-neural-networks few-shot-learning gans image-segmentation iseg-challenge medical-image-analysis multi-modal-imaging semi-supervised-gan semi-supervised-learning tensorflow unet-3d unet-tensorflow weightnorm-3d

bmirds / deepslide
medical-image-analysis,Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks." A sliding window framework for classification of high resolution whole-slide images, often microscopy or histopathology images.
Organization: bmirds
Home Page: https://www.nature.com/articles/s41598-019-40041-7
histopathology-images microscopy sliding-windows medical-image-analysis resnet wsi lung cancer pathology-image

bmirds / histogan
medical-image-analysis,Code for "Generative Image Translation for Data Augmentation in Colorectal Histopathology Images" full paper at ML4H Workshop at NeurIPS 2019.
Organization: bmirds
Home Page: https://ml4health.github.io/2019/pdf/42_ml4h_preprint.pdf
gan machine-learning data-science artificial-intelligence cyclegan medical-imaging medical-image-analysis

edaaydinea / ai-projects-for-healthcare
medical-image-analysis,This repository is included artificial intelligence, machine learning, data science, computer vision projects related to healthcare.
User: edaaydinea
artificial-intelligence deep-learning healthcare medical-image-analysis medical-imaging medicine-classification

facebookresearch / covidprognosis
medical-image-analysis,COVID deterioration prediction based on chest X-ray radiographs via MoCo-trained image representations
Organization: facebookresearch
Home Page: https://arxiv.org/abs/2101.04909
medical-imaging deep-learning radiography x-ray pytorch covid-19 medical-image-analysis

fahadshamshad / awesome-transformers-in-medical-imaging
medical-image-analysis,A collection of resources on applications of Transformers in Medical Imaging.
User: fahadshamshad
transformers vision-transformers medical-imaging medical-image-analysis clinical-report medical-report-generate deep-neural-networks medical-image-segmentation medical-image-classification medical-image-detection

fepegar / torchio
medical-image-analysis,Medical imaging toolkit for deep learning
User: fepegar
Home Page: http://www.torchio.org
pytorch medical-image-computing deep-learning data-augmentation medical-images machine-learning python medical-image-processing medical-image-analysis medical-imaging-datasets medical-imaging-with-deep-learning augmentation

fitushar / 3d-medical-imaging-preprocessing-all-you-need
medical-image-analysis,This Repo Will contain the Preprocessing Code for 3D Medical Imaging
User: fitushar
medical-imaging pre-processing 3d-preproceing normalization resampling python simpleitk registration 3d-padding crop

frankkramer-lab / covid19.miscnn
medical-image-analysis,Robust Chest CT Image Segmentation of COVID-19 Lung Infection based on limited data
Organization: frankkramer-lab
covid-19 medical-image-analysis covid-19-ct segmentation pneumonia lung-disease infection 3d-unet lung-segmentation medical-imaging

frankkramer-lab / miscnn
medical-image-analysis,A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning
Organization: frankkramer-lab
deep-learning convolutional-neural-networks medical-image-processing medical-image-segmentation framework computer-vision clinical-decision-support tensorflow medical-image-analysis medical-imaging

gallickgunner / volume-renderer
medical-image-analysis,A basic Volume Renderer mainly for Medical Images like CT-Scans and MRI Images
User: gallickgunner
medical-image-analysis medical-imaging medical-visualization scientific-visualization volume-renderer volume-rendering

gewelsji / vps
medical-image-analysis,Official website for "Video Polyp Segmentation: A Deep Learning Perspective (MIR 2022)"
User: gewelsji
video-polyp-segmentation video-object-segmentation awesome-polyp-segmentation polyp-segmentation colonoscopy medical-image-segmentation medical-image-analysis pytorch deep-learning jittor

huanglizi / lvit
medical-image-analysis,[IEEE Transactions on Medical Imaging/TMI] This repo is the official implementation of "LViT: Language meets Vision Transformer in Medical Image Segmentation"
User: huanglizi
medical-image-analysis multimodal-learning pytorch segmentation vision-language

hzfu / covid19_imaging_ai_paper_list
medical-image-analysis,COVID-19 imaging-based AI paper collection
User: hzfu
covid-19 medical-image-analysis paper-list

jeya-maria-jose / medical-transformer
medical-image-analysis,Official Pytorch Code for "Medical Transformer: Gated Axial-Attention for Medical Image Segmentation" - MICCAI 2021
User: jeya-maria-jose
pytorch segmentation medical-imaging medical-image-analysis deep-learning transformers attention transformer

johof / lungmask
medical-image-analysis,Automated lung segmentation in CT
User: johof
chest-ct covid-19 covid-19-ct lung-disease lung-lobes lung-segmentation medical-image-analysis medical-image-processing medical-imaging

josedolz / hyperdensenet
medical-image-analysis,This repository contains the code of HyperDenseNet, a hyper-densely connected CNN to segment medical images in multi-modal image scenarios.
User: josedolz
cnn fcn 3d-cnn convolutional-neural-networks hyperdensenet medical-image-processing segmentation image-segmentation deep-learning deep-neural-networks theano segment-medical-images 3d-convolutional-network deep-learning-algorithms brain-segmentation multi-modal-imaging densenet neural-networks medical-image-analysis medical-image-segmentation

josedolz / livianet
medical-image-analysis,This repository contains the code of LiviaNET, a 3D fully convolutional neural network that was employed in our work: "3D fully convolutional networks for subcortical segmentation in MRI: A large-scale study"
User: josedolz
cnn convolutional-neural-networks image-segmentation deep-learning medical-imaging 3d-convolutional-network 3d-cnn medical-image-processing convolutional-networks theano

junyuchen245 / transformer_for_medical_image_analysis
medical-image-analysis,A collection of papers about Transformer in the field of medical image analysis.
User: junyuchen245
medical-image-analysis medical-image-processing pytorch tensorflow transformer vision-transformer

jzk00 / radiomics-features-extractor
medical-image-analysis,Hand-crafted radiomics and deep learning-based radiomcis features extraction.
User: jzk00
radiomics-feature-extraction medical-image-analysis radiomics

kaushalya / medclip
medical-image-analysis,A multi-modal CLIP model trained on the medical dataset ROCO
User: kaushalya
Home Page: https://huggingface.co/spaces/kaushalya/medclip-roco
transformers jax flax huggingface machine-learning medical-image-analysis

koriavinash1 / deepbrainseg
medical-image-analysis,Fully automatic brain tumour segmentation using Deep 3-D convolutional neural networks
User: koriavinash1
biomedical-image-analysis deep-learning brats ensemble-learning deep-convolutional-neural-networks brain-tumor-segmentation segmentation artificial-intelligence medical-image-analysis brain-segmentation

m3dv / acsconv
medical-image-analysis,[IEEE JBHI] Reinventing 2D Convolutions for 3D Images - 1 line of code to convert pretrained 2D models to 3D!
Organization: m3dv
acs-convolution 3d-convolution 3d-images medical-image-analysis

mazurowski-lab / segment-anything-medical-evaluation
medical-image-analysis,Code for "Segment Anything Model for Medical Image Analysis: an Experimental Study" in Medical Image Analysis
Organization: mazurowski-lab
Home Page: https://arxiv.org/abs/2304.10517
medical-image-analysis medical-imaging segment-anything segment-anything-model segmentation

medmnist / medmnist
medical-image-analysis,[pip install medmnist] 18x Standardized Datasets for 2D and 3D Biomedical Image Classification
Organization: medmnist
Home Page: https://medmnist.com/
dataset benchmark automl mnist medical medical-image-analysis medmnist multi-modal decathlon medical-imaging

mic-dkfz / medicaldetectiontoolkit
medical-image-analysis,The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.
Organization: mic-dkfz
detection retina-unet object-detection mask-rcnn 3d-models deep-learning retina-net deep-neural-networks segmentation semantic-segmentation

mic-dkfz / mednext
medical-image-analysis,[MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.
Organization: mic-dkfz
Home Page: https://arxiv.org/pdf/2303.09975
convnext medical-image-analysis medical-image-segmentation medical-imaging transformers unet-image-segmentation mednext ct-segmentation medical-ai mri-segmentation

mkang315 / bgf-yolo
medical-image-analysis,[MICCAI'24] Official implementation of "BGF-YOLO: Enhanced YOLOv8 with Multiscale Attentional Feature Fusion for Brain Tumor Detection".
User: mkang315
afpn bi-level-routing-attention biformer bifpn br35h-brain-tumor-detection-2020 cbam ciou-loss computer-vision-algorithms deep-learning-framework deep-neural-networks

mkang315 / rcs-yolo
medical-image-analysis,[MICCAI'23] Official implementation of "RCS-YOLO: A Fast and High-Accuracy Object Detector for Brain Tumor Detection".
User: mkang315
brain-tumor-detection computer-vision convolutional-neural-networks deep-learning deep-neural-networks medical-image-analysis object-detection reparameterization yolo br35h-brain-tumor-detection-2020

mlcommons / gandlf
medical-image-analysis,A generalizable application framework for segmentation, regression, and classification using PyTorch
Organization: mlcommons
Home Page: https://gandlf.org
deep-learning regression classification segmentation data-augmentation biomedical-image-processing medical-imaging framework clinical-workflow machine-learning

mlmed / torchxrayvision
medical-image-analysis,TorchXRayVision: A library of chest X-ray datasets and models. Classifiers, segmentation, and autoencoders.
Organization: mlmed
Home Page: https://mlmed.org/torchxrayvision
medical-imaging medical-ai deep-learning machine-learning transfer-learning dataset image-classification medical-image-processing medical-application medical

natandrade / tutorial-medical-image-registration
medical-image-analysis,Medical Image Registration
User: natandrade
medical-image-analysis medical-image-processing medical-image-registration medical-imaging tutorial-medical-image-registration

niftk / niftynet
medical-image-analysis,[unmaintained] An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy
Organization: niftk
Home Page: http://niftynet.io
tensorflow distributed ml neural-network python python2 python3 pip deep-neural-networks deep-learning

nyukat / breast_cancer_classifier
medical-image-analysis,Deep Neural Networks Improve Radiologists' Performance in Breast Cancer Screening
Organization: nyukat
Home Page: https://ieeexplore.ieee.org/document/8861376
pytorch breast-cancer classification pretrained-models deep-learning neural-network breast-cancer-diagnosis medical-imaging medical-image-analysis tensorflow

omid-nejati / medvit
medical-image-analysis,MedViT: A Robust Vision Transformer for Generalized Medical Image Classification (Computers in Biology and Medicine 2023)
User: omid-nejati
image-classification medical-image-processing medmnist vision-transformer beginner-friendly classification hybrid-model machine-learning medical medical-image-analysis

perslev / multiplanarunet
medical-image-analysis,Multi-Planar UNet for autonomous segmentation of 3D medical images
User: perslev
python deep-learning medical-image-analysis fully-convolutional-network

pykale / pykale
medical-image-analysis,Knowledge-Aware machine LEarning (KALE): accessible machine learning from multiple sources for interdisciplinary research, part of the 🔥PyTorch ecosystem. ⭐ Star to support our work!
Organization: pykale
Home Page: https://pykale.github.io/
machine-learning knowledge-aware-learning computer-vision graph-analysis pytorch medical-image-analysis multimodal-learning transfer-learning domain-adaptation data-science deep-learning meta-learning python multimodal

rg2 / xreg
medical-image-analysis,Library and executables for modeling and registration applications in medical image analysis. Particular emphasis on intraoperative fluoroscopic (X-ray) navigation via 2D/3D registration.
User: rg2
cplusplus cpp opencl registration itk x-ray ray-casting medical-image-analysis fluoroscopy similarity-metrics

richardobi / medigan
medical-image-analysis,medigan - A Python Library of Pretrained Generative Models for Medical Image Synthesis
User: richardobi
Home Page: https://medigan.readthedocs.io/en/latest/
computer-vision dataset deep-learning endoscopy gans generation generative-adversarial-network generative-ai generative-model machine-learning magnetic-resonance-imaging medical medical-image-analysis medical-image-dataset medical-imaging python radiology synthesis synthetic-data toolbox

rl4m / pcrlv2
medical-image-analysis,An official implementation of PCRLv2 (pre-training and fine-tuning code are included).
Organization: rl4m
ct-scans medical-image-analysis mri self-supervised-learning x-ray

sharifamit / rvgan
medical-image-analysis,[MICCAI'21] [Tensorflow] Retinal Vessel Segmentation using a Novel Multi-scale Generative Adversarial Network
User: sharifamit
keras tensorflow retinal-vessel-segmentation vessel-segmentation gan generative-adversarial-network generative-adversarial-networks conditional-gan medical-imaging medical-image-analysis

shawnyuen / gans_paper_collection
medical-image-analysis,
User: shawnyuen
deep-learning generative-adversarial-network tensorflow tensorlayer keras pytorch torch theano gans cgans

suyashkumar / dicom
medical-image-analysis,⚡High Performance DICOM Medical Image Parser in Go.
User: suyashkumar
dicom dicom-images golang golang-library golang-package parser medical medical-imaging pacs streaming

tissueimageanalytics / tiatoolbox
medical-image-analysis,Computational Pathology Toolbox developed by TIA Centre, University of Warwick.
Organization: tissueimageanalytics
Home Page: https://warwick.ac.uk/tia
python computational-pathology whole-slide-imaging deep-learning digital-pathology histopathology image-analysis machine-learning tissue-analysis tissue-segmentation cell-classification cell-segmentation medical-image-analysis stain-normalization

wulalago / daf3d
medical-image-analysis,Deep Attentive Features for Prostate Segmentation in 3D Transrectal Ultrasound
User: wulalago
attention-mechanism medical-image-analysis prostate-segmentation pytorch-implementation

xmindflow / awesome-foundation-models-in-medical-imaging
medical-image-analysis,A curated list of foundation models for vision and language tasks in medical imaging
Organization: xmindflow
Home Page: https://arxiv.org/abs/2310.18689
foundation-models medical medical-image-analysis medical-image-processing medical-imaging sam

xmindflow / awesome_mamba
medical-image-analysis,Computation-Efficient Era: A Comprehensive Survey of State Space Models in Medical Image Analysis
Organization: xmindflow
computer-vision deep-learning gnn image-enhancement large-language-models llm mamba mamba-state-space-models medical-image-analysis medical-image-processing medical-image-segmentation medical-imaging natural-language-processing remote-sensing speech-processing state-space-model survey time-series

xmindflow / daeformer
medical-image-analysis,[MICCAI 2023] DAE-Former: Dual Attention-guided Efficient Transformer for Medical Image Segmentation
Organization: xmindflow
Home Page: https://arxiv.org/abs/2212.13504
deep-learning efficient-transformers medical-image-analysis medical-image-segmentation pytorch segmentation transformer unet-image-segmentation