Topic: linkage-disequilibrium Goto Github
Some thing interesting about linkage-disequilibrium
Some thing interesting about linkage-disequilibrium
linkage-disequilibrium,PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files
Organization: bgi-shenzhen
linkage-disequilibrium,LDlinkR
Organization: cbiit
linkage-disequilibrium,LDlink is a suite of web-based applications designed to easily and efficiently interrogate linkage disequilibrium in population groups. Each included application is specialized for querying and displaying unique aspects of linkage disequilibrium.
Organization: cbiit
Home Page: https://ldlink.nci.nih.gov
linkage-disequilibrium,This method incorporates dense linkage disequilibrium block structure of SNPs for prioritizing a set of genetic variants using GWAS summary statisticis before performing fine-mapping.
User: cmomo
linkage-disequilibrium,Working wiht the Ensembl Perl API
User: dhimmel
linkage-disequilibrium,Efficient Local Ancestry Inference
User: haplotype
linkage-disequilibrium,Plot .ld with LDHeatmap (first case applied to Equine 65k Microarray)
User: hernanmd
linkage-disequilibrium,Visualizing Linkage Disequilibrium using 1000 Genomes Data
User: joe-nas
linkage-disequilibrium,This is web server API for http://topld.genetics.unc.edu
User: linnabrown
linkage-disequilibrium,R front-end for TASSEL
Organization: maize-genetics
Home Page: https://rtassel.maizegenetics.net
linkage-disequilibrium,Get information about direction of agreement for any two lists of SNPs, based on LDlink and plink
User: mikedacre
linkage-disequilibrium,Fast calculations of linkage-disequilibrium in large-scale human cohorts
User: mklarqvist
Home Page: https://mklarqvist.github.io/tomahawk/
linkage-disequilibrium,By leveraging ensemble learning, this program can be used to analyze the Linkage Disequilibrium between SNPs in each Indonesian rice chromosomes. Developed using Python 3.9.12.
User: nicholasdominic
linkage-disequilibrium,Generating a weighed average of LDSTORE matrices for locus-based fine-mapping.
User: pintaius
linkage-disequilibrium,ld-tools: toolkit for linkage disequilibrium calculation designed to work locally
User: platonb
linkage-disequilibrium,Adjacency-constrained hierarchical clustering of a similarity matrix
User: pneuvial
Home Page: https://pneuvial.github.io/adjclust/
linkage-disequilibrium,Causal Mixture Model for GWAS summary statistics
Organization: precimed
linkage-disequilibrium,echoverse module: LD downloading and processing
Organization: rajlabmssm
linkage-disequilibrium,Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.
Organization: rajlabmssm
Home Page: https://rajlabmssm.github.io/echolocatoR
linkage-disequilibrium,A python library to develop genomic data simulators
User: remytuyeras
Home Page: http://www.normalesup.org/~tuyeras/node_diss/blg/haplodx.html
linkage-disequilibrium,Impact of LD regional heterogeneity on genome prediction and heritability estimation in livestock
User: rendy0505
linkage-disequilibrium,A tool for linkage disequilibrium-informed comparison of haplotypes among sibling embryos.
User: scikal
linkage-disequilibrium,Modeling and Analysis of (Statistical) Genetics data in python
User: shz9
Home Page: https://shz9.github.io/magenpy/
linkage-disequilibrium,:bookmark: Get SNP proxies from the 1000 Genomes Project.
User: slowkow
linkage-disequilibrium,:orange_book: Explore 1000 Genomes variant data with JavaScript.
User: slowkow
Home Page: http://slowkow.github.io/snpbook
linkage-disequilibrium,LDMAP software for mapping linkage disequilibrium using the Malecot-Morton model.
Organization: soton-compgen
linkage-disequilibrium,ldshrink: a one-stop R package for shrinkage estimation of linkage disequilibrium
Organization: stephenslab
linkage-disequilibrium,Genomewide Epistasis Analysis on Bacteria
User: sudaraka88
linkage-disequilibrium,GWAS Pre-Processing Pipeline
User: tbrunetti
linkage-disequilibrium,LDlinkR: An R package for calculating linkage disequilibrium in human populations of interest
User: timyers
linkage-disequilibrium,Simulator for the Wright-Fisher model of genetic drift for haploid and diploid populations
User: tommakesthings
linkage-disequilibrium,Implement R-prime measure of linkage disequilibrium
User: vforget
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