importation_status.txt to be in BED format about clonalframeml

[xavierdidelot]

Thanks for the suggestion. Export of the recombination events is now supported in BED format. This option is activated using the argument "-chromosome_name" followed by the name of chromosome to use in the first column of the BED file, for example "-chromosome_name chr". If this argument is not used, the old recombination format is used for backward compatibility.

[alexjironkin]

Just noticed this after compiling and running on a dataset we had, BED files generally don't have header line. So bedtools complained about the header line. Can we remove it for BED output only? I can create another pull request if you want.

[xavierdidelot]

Done (-:
Xavier

On 10 December 2015 at 17:39, alexjironkin [email protected] wrote:

Just noticed this after compiling and running on a dataset we had, BED
files generally don't have header line. So bedtools complained about the
header line. Can we remove it for BED output only? I can create another
pull request if you want.

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