Comments (1)
xavierdidelot
commented on August 21, 2024
The input file needs to have all blocks containing all sequences. Since you have blocks with missing sequences, you could get a valid input file by either remove these blocks, or add the sequences into these blocks using gaps (N or - characters) only. The first solution is preferable if you have many sequences missing in a block and you want to focus more on the core, the second solution is preferable if you have only a few sequences missing in a block and you really want to analyse these blocks.
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