Comments (6)
Sometimes labels are not shown if they are too long, so that there is no space for them.
You will have to edit the script to solve this or add the labels separately.
from clonalframeml.
Thanks! I work on that.
Also, when I notice recombination on a branch such as long dark blue line, how do I correct that?
Thanks again
from clonalframeml.
This is already corrected in the ClonalFrameML output tree.
from clonalframeml.
Perfect! So that means the tree topology reflects the correction?
from clonalframeml.
The branch lengths are corrected. ClonalFrameML does not change the tree topology.
from clonalframeml.
Thanks!
from clonalframeml.
Related Issues (20)
- Is it better to order genes by the reference genome for a xmfa file ??? HOT 2
- std::bad_alloc problem HOT 1
- Are there any detailed description of the output pdf from cfml_results.R? HOT 1
- ERROR: Token: ((( Found left bracket but no right bracket HOT 1
- High recombination sequence detection HOT 3
- Inquiry on difference of Recombination Visualization between cfml_results.R and Phandango HOT 1
- R script plot colours are not explained HOT 3
- Can I use SNP multiple sequence alignment matrix and a tree build based on it as inputs? HOT 5
- contructed a new whole genome alignment HOT 1
- Fix R/theta, 1/delta and Nu
- Script cfml_results.R not found HOT 4
- how to create the msa file for fragmented genomes HOT 1
- nonrecombinant alignment output empty HOT 1
- What do you mean I don't understand the output file HOT 1
- ERROR: convert_NewickTree_to_marginal_tree(): Newick tree tip label was not expected HOT 2
- option -fasta_file_list true? HOT 1
- Segmentation fault after reading tree HOT 2
- N/A on posterior means on the per branch model HOT 2
- Correlate positions between input alignment/graphical output HOT 1
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from clonalframeml.