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Source code for GNN-LSPE (Graph Neural Networks with Learnable Structural and Positional Representations), ICLR 2022

Home Page: http://arxiv.org/abs/2110.07875

License: MIT License

Python 87.95% Shell 5.20% Jupyter Notebook 6.85%
attention geometric-deep-learning gnn gnn-lspe graph-deep-learning graph-neural-networks graph-representation-learning graph-transformer graphs lspe message-passing molecules positional-encoding representation-learning transformer-networks transformers

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gnn-lspe's Issues

Faced Issue while reproducing the results

I got the following error after following the step 1 and step 2 for the installation.
ImportError: dlopen(/Users/abhishekgadekar/opt/anaconda3/envs/gnn_lspe/lib/python3.7/lib-dynload/_ctypes.cpython-37m-darwin.so, 0x0002): Library not loaded: @rpath/libffi.6.dylib
This error occured when I ran the following command:

Run the main file (at the root of the project)

python main_ZINC_graph_regression.py --config 'configs/GatedGCN_ZINC_LSPE.json' # for CPU
python main_ZINC_graph_regression.py --gpu_id 0 --config 'configs/GatedGCN_ZINC_LSPE.json' # for GPU

It would be really helpful if you could provide a fix for this issue. I also checked by installing libffi by using pip, but that also couldn't solve the issue.

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