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buildkit

concurrent, cache-efficient, and Dockerfile-agnostic builder toolkit

cdt

combinatorial-experiment

Lightweight hyperparameter experimentation framework for small ML jobs.

cookiecutter-pypackage

dna-bot

docker.github.io

Source repo for Docker's Documentation

gillespie_m3

Python3 repository for the MRes in Systems and Synthetic Biology Coursework 3 (Theoretical Systems Biology) at Imperial College London.

gnn-lspe

Fork of Official Implementation of Graph Neural Networks with Learnable Structural and Positional Representations (http://arxiv.org/abs/2110.07875)

ic-bioeng-mib

Python implementation of the Modelling in Biology Part 1 problem sheet set.

linear_operator

A LinearOperator implementation to wrap the numerical nuts and bolts of GPyTorch

petastorm

Petastorm library enables single machine or distributed training and evaluation of deep learning models from datasets in Apache Parquet format. It supports ML frameworks such as Tensorflow, Pytorch, and PySpark and can be used from pure Python code.

polars-xdt

Polars plugin offering eXtra stuff for DateTimes

probability

Probabilistic reasoning and statistical analysis in TensorFlow

pytorch_geometric

Graph Neural Network Library for PyTorch

scheduler-tools

Tools for making PBS less painful.

smart_open

Utils for streaming large files (S3, HDFS, gzip, bz2...)

torchmetrics

Torchmetrics - Machine learning metrics for distributed, scalable PyTorch applications.