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Jupyter Dashboards for MicroManager OpenScan-TimeTagger Operation and SmartMicroscope Modules

Python 0.72% Jupyter Notebook 99.28%

dashboardsformm's Introduction

Micromanager OpenScan supported FLIM collection and processing from Python

  1. Pycromanager- Demo test A1:0523 Local Max Local Min calculation on demo-camera configuration A1:0701 Pycromanager tests

  2. Pycromanager: CAMM a. PyImageJ: Stitching support b. QuPath: Annotation and Pyramid-tiff support c. Denoising, Super Resolution Model support d. Autofocus e. Multimodal support B2: CAMM

  3. Swabian - Demo test C1: Swabian on OWS C2: read Swabian-headers C3: Swabian FileReaders and FLIM C4: Custom Measurements C5: run swabian on OWS2 and sync C5: Run swabian

  4. Dashboards : Voila and Panel D1: voila examples D2: voila Pycromanager Dashboards D3: panel examples D4: panel Pycromanager dashboards and tabs D6: swabian real time dashboard on OWS2, PyMMCore D6: pycromanager display, roi, swabian FR dash

dash env: conda install python conda install jupyterlab pip install pycromanager conda install panel conda install nodejs

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