Topic: gwas-tools Goto Github
Some thing interesting about gwas-tools
Some thing interesting about gwas-tools
gwas-tools,A simple GWAS parser + CLI
User: abought
gwas-tools,kGWASflow is a Snakemake workflow for performing k-mers-based GWAS.
User: akcorut
Home Page: https://github.com/akcorut/kGWASflow/wiki
gwas-tools,Scripts of Final Master Project
User: antoniogomez
gwas-tools,Higher-order genetic interaction discovery with network-based biological priors.
Organization: borgwardtlab
gwas-tools,Recombines real genomic segments to simulate whole genomes
Organization: epistasislab
gwas-tools,tips and tricks in genome-wide association studies - a tutorial
User: esohkevin
gwas-tools,SCAVENGE is a method to optimize the inference of functional and genetic associations to specific cells at single-cell resolution.
User: fl-yu
gwas-tools,A faster lmm for GWAS. Supports GPU backend.
Organization: genetics-statistics
gwas-tools,gaiaAssociation is a tool to detect the cell specific enrichment of loci in regulatory regions through the sum of non-identical binomials
Organization: greallylab
Home Page: https://greallylab.com
gwas-tools,Just another wrapper for pathway analysis using MAGMA
User: hagax8
gwas-tools,Coupled Mixed Model
User: haohanwang
gwas-tools,Flashfm: multi-trait fine-mapping that uses GWAS summary statistics from several traits
User: jennasimit
Home Page: https://jennasimit.github.io/flashfm/
gwas-tools,MGflashfm: joint fine-mapping of genetic association signals in several traits amongst multiple population groups.
User: jennasimit
Home Page: https://jennasimit.github.io/MGflashfm/
gwas-tools,Three bacterial GWAS methods all rolled into one easy-to-use R package
User: katiesaund
gwas-tools,Code and simulations using biologically annotated neural networks
Organization: lcrawlab
Home Page: https://journals.plos.org/plosgenetics/article?id=10.1371/journal.pgen.1009754
gwas-tools,Code and simulations using interaction-LD score regression
Organization: lcrawlab
Home Page: https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/W6MA8J
gwas-tools,The multivariate MArginal ePIstasis Test
Organization: lcrawlab
Home Page: https://lcrawlab.github.io/mvMAPIT/
gwas-tools,multiple imputation for association studies
User: lightning-auriga
gwas-tools,Code and Tutorials for Running the MArginal ePIstasis Test (MAPIT)
User: lorinanthony
gwas-tools,MultiGWAS tool for Genome-Wide Association Studies (GWAS) in plants (diploide and tetraploide)
User: luisgarreta
gwas-tools,MendelianRandomization is an R package for assessing causal relationships using genetic variants as instrumental variables
User: matthijsknigge
gwas-tools,Clean and Process GWAS Results for the Drosophila Genetic Reference Panel
User: maya123z
gwas-tools,A Bayesian grouped mixture of regressions model capable of estimating SNP marker effect sizes for multiple outcomes simultaneously
Organization: medical-genomics-group
gwas-tools,Application of the Simple Sum method for testing co-localization of GWAS with any other SNP-level data (e.g. eQTL data)
User: naim-panjwani
Home Page: https://locusfocus.research.sickkids.ca
gwas-tools,
User: npredey
gwas-tools,Code and simulations using an Ensemble of Single-Effect Neural Networks (ESNN)
Organization: ramachandran-lab
Home Page: https://www.sciencedirect.com/science/article/pii/S2589004222008252
gwas-tools,A curated list (with links) of useful tools for genome-wide association analysis.
User: raydebashree
gwas-tools,Joint meta-analysis of 2-df gene and gene-environment tests in GWAS.
User: raydebashree
gwas-tools,mvtests: a suite of functions for testing genetic associations of multiple traits (a.k.a. cross-phenotype associations)
User: raydebashree
gwas-tools,A statistical test of pleiotropic effect of a genetic variant on two traits using GWAS summary statistics
User: raydebashree
gwas-tools,Modified transmission disequilibrium test (TDT) for GWAS using case-parent/control-parent trios.
User: raydebashree
gwas-tools,weighted GWAS (heteroskedastic GWAS)
User: rcorty
gwas-tools,A Python package for creating high-quality manhattan and Q-Q plots from GWAS results.
User: shujiahuang
gwas-tools,R package 📦 with ggplot2 extensions for GWAS summary statistics (still in 🚧)
User: sinarueeger
gwas-tools,Tool for genome wide association studies with Bayesian inference and statistical learning
User: snaketron
gwas-tools,R package to perform data pre-processing for more informative bacterial GWAS
Organization: snitkin-lab-umich
gwas-tools,Make interactive LocusZoom plots from a local GWAS file
Organization: statgen
Home Page: https://statgen.github.io/localzoom/
gwas-tools,A Javascript/d3 embeddable plugin for interactively visualizing statistical genetic data from customizable sources.
Organization: statgen
Home Page: https://statgen.github.io/locuszoom/
gwas-tools,A web service to upload and share GWAS results with LocusZoom.js
Organization: statgen
Home Page: https://my.locuszoom.org
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