abrf2016's Introduction

ABRF2018

[Workshop at ABRF 2016 SW2] (https://conf.abrf.org/sw2-galaxy-platform-accessible-core-laboratory-solution-proteogenomic-analysis-and-informatics)

(SW2) The Galaxy Platform as an Accessible, Core Laboratory Solution for Proteogenomic Analysis and Informatics Sunday, April 22, 2018 (8:00am-12:00pm)

Organizers: Pratik Jagtap and Tim Griffin, University of Minnesota

Instructors: Tim Griffin, Pratik Jagtap and Praveen Kumar

This workshop

Workshop goals:

Introduce the Galaxy framework as a solution for data analysis across ‘omics’ domains
Provide hands-on experience to attendees in using Galaxy
Demonstrate use of Galaxy for a proteogenomic analysis (RNA-seq and proteomic integrative analysis)
Lay the foundation for attendees to implement Galaxy at their own facility or institution to meet ‘omics’ data analysis needs (either specific to one domain or for multi-omics)

Workshop Schedule: Saturday February 20, 2016

8:00am-8:15am Introduction to Galaxy Platform and multi-omic studies. (Pratik Jagtap)
8:15am-9:15am RNASeq Data Processing: Data Analysis using Galaxy platform. (Praveen Kumar)
9:15 am – 10:00 am Hands-on session for proteomics data analysis using Galaxy. (Tim Griffin)
10:00 am – 10:30 am Morning Refreshment Break
10:30am – 12:00pm Identification of novel proteoforms and visualization. (Pratik Jagtap)
12:00pm – 1:00pm Lunch

Workshop materials: