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fitexamples

fwritetest

just a test

ga

hiv_modelling

hmer

An R package for Bayes Linear emulation and history matching.

individual

R Package for individual based epidemiological models

individual.jl

Tools to specify and simulate individual based models, using applied category theory

individual.network

individualrewrite

rewriting Individual.jl using graph rewriting for rewriting

infectionsim

spatial simulation of stochastic infection dynamics in a city

lemma

Local Epidemic Modeling for Management & Action (LEMMA)

lemma-forecasts

Outputs of the LEMMA model for COVID-19 forecasts

lnam

marginallogdensities.jl

Marginalized log-probability functions in Julia

mash-main

A suite of packages to implement the MASH project

mcfun

fun with everything monte carlo, quasi-monte carlo, randomized quasi-monte carlo

mcmc

C++ & R code for Markov Chain Monte Carlo estimation (Gibbs sampling, MH random walk, various flavors of adaptive MCMC, etc), and functions relevant to the truncated multivariate Gaussian distribution

measuretheory.jl

"Distributions" that might not add to one.

mgcv

:exclamation: This is a read-only mirror of the CRAN R package repository. mgcv — Mixed GAM Computation Vehicle with Automatic Smoothness Estimation

ml

Various vaguely machine learning related algorithms, mainly in R & C++

modelexploration.jl

Leveraging AlgebraicJulia to provide an interface for scientists to explore spaces of models.

modellingwithdata

practice from https://modelingwithdata.org

mosquito_estimation

ncov

network

Classes for Relational Data

networkepidemics

learning d3.js through network simulations because why do something the easy way when you could do it the cool way

optimex

examples of optimization for OR and business processes

ph252e

Public Health 252E at UC Berkeley, Fall 2016

piecewisedeterministicmarkovprocesses.jl

Piecewise Deterministic Markov Processes in Julia

ploscompbio_2013

code for generating figures and table from doi:10.1371/journal.pcbi.1003327