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swig-fortran will allow us to call this from existing fortran code.

This line refers to a file not present in the repository.

Hello,

issue-input.txt
issue-output.txt
(files added as .txt extension due to issue restriction)

I run the following valid 2012 n42 xml file through SpecUtils, and it creates a 2012 n42 xml that fails schema validation.

$ xmlstarlet val --err --xsd SpecUtils/unit_tests/test_data/schema/n42.xsd issue-input.xml
issue-input.xml - valid

It creates two errors. xmlstarlet val --err --xsd SpecUtils/unit_tests/test_data/schema/n42.xsd issue-output.xml

1. An InterSpec definition needs to be added to the xml header:

22.27: Namespace prefix InterSpec on DetectorType is not defined
			<InterSpec:DetectorType>RS-701</InterSpec:DetectorType>

2. And, it also creates a RadInstrementState that lacks a ref:

41.22: Element '{http://physics.nist.gov/N42/2011/N42}RadInstrumentState': The attribute 'radInstrumentInformationReference' is required but missing.

Using this:

SpecFile specFile;
if(!specFile.load_N42_from_data(inputContent)) {
	return;
}
specFile.write_to_file(outputFilename, SaveSpectrumAsType::N42_2012);

Thanks,

arichnad

Hi,

Sorry for just reporting without providing the resolusion...

I want to use the library to read .N42 data and process the data using python using python binding of the library.
My main systems are Linux boxes (Fedora, x86_64), and have boost-python3-1.78.0-9.fc37.x86_64 rpm installed.
I did CMaking as
$ cmake -DSpecUtils_PYTHON_BINDINGS=ON -DBoost_PYTHON_LIBRARY=/usr/lib64/libboost_python311.so.1.78.0 -DPYTHON_LIBRARY=/usr/lib64/libpython3.so -DPYTHON_INCLUDE_DIR=/usr/include/python3.11 ../SpecUtils.git/

The make failed like the following:
[ 2%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile.cpp.o
[ 5%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_pcf.cpp.o
[ 8%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_cnf.cpp.o
[ 11%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_n42.cpp.o
[ 14%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_spc.cpp.o
[ 17%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_chn.cpp.o
[ 20%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_spe.cpp.o
[ 23%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_csv.cpp.o
[ 26%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_gr135.cpp.o
[ 29%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_aram.cpp.o
[ 32%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_lis.cpp.o
[ 35%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_lzs.cpp.o
[ 38%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_phd.cpp.o
[ 41%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_tka.cpp.o
[ 44%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_lsrm.cpp.o
[ 47%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_mca.cpp.o
[ 50%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_spmdf.cpp.o
[ 52%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_mps.cpp.o
[ 55%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_multiact.cpp.o
[ 58%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_uraider.cpp.o
[ 61%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_xml_other.cpp.o
[ 64%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_json.cpp.o
[ 67%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecUtilsAsync.cpp.o
[ 70%] Building CXX object CMakeFiles/SpecUtils.dir/src/SerialToDetectorModel.cpp.o
[ 73%] Building CXX object CMakeFiles/SpecUtils.dir/src/EnergyCalibration.cpp.o
[ 76%] Building CXX object CMakeFiles/SpecUtils.dir/src/CubicSpline.cpp.o
[ 79%] Building CXX object CMakeFiles/SpecUtils.dir/src/StringAlgo.cpp.o
[ 82%] Building CXX object CMakeFiles/SpecUtils.dir/src/Filesystem.cpp.o
[ 85%] Building CXX object CMakeFiles/SpecUtils.dir/src/DateTime.cpp.o
[ 88%] Building CXX object CMakeFiles/SpecUtils.dir/src/ParseUtils.cpp.o
[ 91%] Building CXX object CMakeFiles/SpecUtils.dir/src/SpecFile_location.cpp.o
[ 94%] Building CXX object CMakeFiles/SpecUtils.dir/src/D3SpectrumExport.cpp.o
[ 97%] Building CXX object CMakeFiles/SpecUtils.dir/bindings/python/SpecFile_py.cpp.o
/home/furutaka/res/SpecUtils/SpecUtils.git/bindings/python/SpecFile_py.cpp: In function ‘void init_module_SpecUtils()’:
/home/furutaka/res/SpecUtils/SpecUtils.git/bindings/python/SpecFile_py.cpp:1109:7: error: no matching function for call to ‘boost::python::class_SpecUtils::EnergyCalibration::def(const char [14], , boost::python::detail::keywords<3>, const char [77])’
1087 | class_SpecUtils::EnergyCalibration("EnergyCalibration")
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1088 | .def( "type", &SpecUtils::EnergyCalibration::type,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1089 | "Returns the energy calibration type" )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1090 | .def( "valid", &SpecUtils::EnergyCalibration::valid,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1091 | "Returns if the energy calibration is valid." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1092 | .def( "coefficients", &SpecUtils::EnergyCalibration::coefficients, return_internal_reference<>(),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1093 | "Returns the list of energy calibration coeficients.\n"
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1094 | "Will only be empty for SpecUtils.EnergyCalType.InvalidEquationType." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1095 | // TODO: I think we should put a wrapper around channel_energies, and return a proper python list
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1096 | .def( "channelEnergies", &SpecUtils::EnergyCalibration::channel_energies, return_internal_reference<>(),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1097 | "Returns lower channel energies; will have one more entry than the number of channels." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1098 | .def( "deviationPairs", &SpecUtils::EnergyCalibration::deviation_pairs, return_internal_reference<>() )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1099 | .def( "numChannels", &SpecUtils::EnergyCalibration::num_channels,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1100 | "Returns the number of channels this energy calibration is for." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1101 | .def( "channelForEnergy", &SpecUtils::EnergyCalibration::channel_for_energy,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1102 | "Returns channel number (as a double) for the specified energy." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1103 | .def( "energyForChannel", &SpecUtils::EnergyCalibration::energy_for_channel,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1104 | "Returns energy for the specified (as double) channel number." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1105 | .def( "lowerEnergy", &SpecUtils::EnergyCalibration::lower_energy,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1106 | "Returns lowest energy of this energy calibration." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1107 | .def( "upperEnergy", &SpecUtils::EnergyCalibration::upper_energy,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1108 | "Returns highest energy of this energy calibration." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1109 | .def( "setPolynomial", &SpecUtils::EnergyCalibration::set_polynomial,
| ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1110 | args( "NumChannels", "Coeffiecients", "DeviationPairs" ),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1111 | "Sets the energy calibration information from Polynomial defined coefficents." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/boost/python.hpp:18,
from /home/furutaka/res/SpecUtils/SpecUtils.git/bindings/python/SpecFile_py.cpp:51:
/usr/include/boost/python/class.hpp:219:11: note: candidate: ‘template boost::python::class_<T, X1, X2, X3>::self& boost::python::class_<T, X1, X2, X3>::def(const boost::python::def_visitor&) [with W = SpecUtils::EnergyCalibration; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified]’
219 | self& def(def_visitor const& visitor)
| ^~~
/usr/include/boost/python/class.hpp:219:11: note: template argument deduction/substitution failed:
/home/furutaka/res/SpecUtils/SpecUtils.git/bindings/python/SpecFile_py.cpp:1109:7: note: mismatched types ‘const boost::python::def_visitor’ and ‘const char [14]’
1087 | class_SpecUtils::EnergyCalibration("EnergyCalibration")
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1088 | .def( "type", &SpecUtils::EnergyCalibration::type,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1089 | "Returns the energy calibration type" )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1090 | .def( "valid", &SpecUtils::EnergyCalibration::valid,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1091 | "Returns if the energy calibration is valid." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1092 | .def( "coefficients", &SpecUtils::EnergyCalibration::coefficients, return_internal_reference<>(),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1093 | "Returns the list of energy calibration coeficients.\n"
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1094 | "Will only be empty for SpecUtils.EnergyCalType.InvalidEquationType." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1095 | // TODO: I think we should put a wrapper around channel_energies, and return a proper python list
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1096 | .def( "channelEnergies", &SpecUtils::EnergyCalibration::channel_energies, return_internal_reference<>(),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1097 | "Returns lower channel energies; will have one more entry than the number of channels." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1098 | .def( "deviationPairs", &SpecUtils::EnergyCalibration::deviation_pairs, return_internal_reference<>() )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1099 | .def( "numChannels", &SpecUtils::EnergyCalibration::num_channels,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1100 | "Returns the number of channels this energy calibration is for." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1101 | .def( "channelForEnergy", &SpecUtils::EnergyCalibration::channel_for_energy,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1102 | "Returns channel number (as a double) for the specified energy." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1103 | .def( "energyForChannel", &SpecUtils::EnergyCalibration::energy_for_channel,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1104 | "Returns energy for the specified (as double) channel number." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1105 | .def( "lowerEnergy", &SpecUtils::EnergyCalibration::lower_energy,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1106 | "Returns lowest energy of this energy calibration." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1107 | .def( "upperEnergy", &SpecUtils::EnergyCalibration::upper_energy,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1108 | "Returns highest energy of this energy calibration." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1109 | .def( "setPolynomial", &SpecUtils::EnergyCalibration::set_polynomial,
| ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1110 | args( "NumChannels", "Coeffiecients", "DeviationPairs" ),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1111 | "Sets the energy calibration information from Polynomial defined coefficents." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/python/class.hpp:229:11: note: candidate: ‘template boost::python::class_<T, X1, X2, X3>::self& boost::python::class_<T, X1, X2, X3>::def(const char*, F) [with W = SpecUtils::EnergyCalibration; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified]’
229 | self& def(char const* name, F f)
| ^~~
/usr/include/boost/python/class.hpp:229:11: note: template argument deduction/substitution failed:
/home/furutaka/res/SpecUtils/SpecUtils.git/bindings/python/SpecFile_py.cpp:1109:7: note: candidate expects 2 arguments, 4 provided
1087 | class_SpecUtils::EnergyCalibration("EnergyCalibration")
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1088 | .def( "type", &SpecUtils::EnergyCalibration::type,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1089 | "Returns the energy calibration type" )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1090 | .def( "valid", &SpecUtils::EnergyCalibration::valid,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1091 | "Returns if the energy calibration is valid." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1092 | .def( "coefficients", &SpecUtils::EnergyCalibration::coefficients, return_internal_reference<>(),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1093 | "Returns the list of energy calibration coeficients.\n"
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1094 | "Will only be empty for SpecUtils.EnergyCalType.InvalidEquationType." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1095 | // TODO: I think we should put a wrapper around channel_energies, and return a proper python list
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1096 | .def( "channelEnergies", &SpecUtils::EnergyCalibration::channel_energies, return_internal_reference<>(),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1097 | "Returns lower channel energies; will have one more entry than the number of channels." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1098 | .def( "deviationPairs", &SpecUtils::EnergyCalibration::deviation_pairs, return_internal_reference<>() )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1099 | .def( "numChannels", &SpecUtils::EnergyCalibration::num_channels,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1100 | "Returns the number of channels this energy calibration is for." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1101 | .def( "channelForEnergy", &SpecUtils::EnergyCalibration::channel_for_energy,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1102 | "Returns channel number (as a double) for the specified energy." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1103 | .def( "energyForChannel", &SpecUtils::EnergyCalibration::energy_for_channel,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1104 | "Returns energy for the specified (as double) channel number." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1105 | .def( "lowerEnergy", &SpecUtils::EnergyCalibration::lower_energy,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1106 | "Returns lowest energy of this energy calibration." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1107 | .def( "upperEnergy", &SpecUtils::EnergyCalibration::upper_energy,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1108 | "Returns highest energy of this energy calibration." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1109 | .def( "setPolynomial", &SpecUtils::EnergyCalibration::set_polynomial,
| ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1110 | args( "NumChannels", "Coeffiecients", "DeviationPairs" ),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1111 | "Sets the energy calibration information from Polynomial defined coefficents." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/python/class.hpp:238:11: note: candidate: ‘template<class A1, class A2> boost::python::class_<T, X1, X2, X3>::self& boost::python::class_<T, X1, X2, X3>::def(const char*, A1, const A2&) [with A2 = A1; W = SpecUtils::EnergyCalibration; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified]’
238 | self& def(char const* name, A1 a1, A2 const& a2)
| ^~~
/usr/include/boost/python/class.hpp:238:11: note: template argument deduction/substitution failed:
/home/furutaka/res/SpecUtils/SpecUtils.git/bindings/python/SpecFile_py.cpp:1109:7: note: candidate expects 3 arguments, 4 provided
1087 | class_SpecUtils::EnergyCalibration("EnergyCalibration")
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1088 | .def( "type", &SpecUtils::EnergyCalibration::type,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1089 | "Returns the energy calibration type" )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1090 | .def( "valid", &SpecUtils::EnergyCalibration::valid,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1091 | "Returns if the energy calibration is valid." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1092 | .def( "coefficients", &SpecUtils::EnergyCalibration::coefficients, return_internal_reference<>(),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1093 | "Returns the list of energy calibration coeficients.\n"
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1094 | "Will only be empty for SpecUtils.EnergyCalType.InvalidEquationType." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1095 | // TODO: I think we should put a wrapper around channel_energies, and return a proper python list
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1096 | .def( "channelEnergies", &SpecUtils::EnergyCalibration::channel_energies, return_internal_reference<>(),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1097 | "Returns lower channel energies; will have one more entry than the number of channels." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1098 | .def( "deviationPairs", &SpecUtils::EnergyCalibration::deviation_pairs, return_internal_reference<>() )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1099 | .def( "numChannels", &SpecUtils::EnergyCalibration::num_channels,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1100 | "Returns the number of channels this energy calibration is for." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1101 | .def( "channelForEnergy", &SpecUtils::EnergyCalibration::channel_for_energy,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1102 | "Returns channel number (as a double) for the specified energy." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1103 | .def( "energyForChannel", &SpecUtils::EnergyCalibration::energy_for_channel,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1104 | "Returns energy for the specified (as double) channel number." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1105 | .def( "lowerEnergy", &SpecUtils::EnergyCalibration::lower_energy,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1106 | "Returns lowest energy of this energy calibration." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1107 | .def( "upperEnergy", &SpecUtils::EnergyCalibration::upper_energy,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1108 | "Returns highest energy of this energy calibration." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1109 | .def( "setPolynomial", &SpecUtils::EnergyCalibration::set_polynomial,
| ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1110 | args( "NumChannels", "Coeffiecients", "DeviationPairs" ),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1111 | "Sets the energy calibration information from Polynomial defined coefficents." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/python/class.hpp:245:11: note: candidate: ‘template<class Fn, class A1, class A2> boost::python::class_<T, X1, X2, X3>::self& boost::python::class_<T, X1, X2, X3>::def(const char*, Fn, const A1&, const A2&) [with A1 = Fn; A2 = A1; W = SpecUtils::EnergyCalibration; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified]’
245 | self& def(char const* name, Fn fn, A1 const& a1, A2 const& a2)
| ^~~
/usr/include/boost/python/class.hpp:245:11: note: template argument deduction/substitution failed:
/home/furutaka/res/SpecUtils/SpecUtils.git/bindings/python/SpecFile_py.cpp:1109:7: note: couldn’t deduce template parameter ‘Fn’
1087 | class_SpecUtils::EnergyCalibration("EnergyCalibration")
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1088 | .def( "type", &SpecUtils::EnergyCalibration::type,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1089 | "Returns the energy calibration type" )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1090 | .def( "valid", &SpecUtils::EnergyCalibration::valid,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1091 | "Returns if the energy calibration is valid." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1092 | .def( "coefficients", &SpecUtils::EnergyCalibration::coefficients, return_internal_reference<>(),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1093 | "Returns the list of energy calibration coeficients.\n"
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1094 | "Will only be empty for SpecUtils.EnergyCalType.InvalidEquationType." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1095 | // TODO: I think we should put a wrapper around channel_energies, and return a proper python list
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1096 | .def( "channelEnergies", &SpecUtils::EnergyCalibration::channel_energies, return_internal_reference<>(),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1097 | "Returns lower channel energies; will have one more entry than the number of channels." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1098 | .def( "deviationPairs", &SpecUtils::EnergyCalibration::deviation_pairs, return_internal_reference<>() )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1099 | .def( "numChannels", &SpecUtils::EnergyCalibration::num_channels,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1100 | "Returns the number of channels this energy calibration is for." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1101 | .def( "channelForEnergy", &SpecUtils::EnergyCalibration::channel_for_energy,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1102 | "Returns channel number (as a double) for the specified energy." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1103 | .def( "energyForChannel", &SpecUtils::EnergyCalibration::energy_for_channel,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1104 | "Returns energy for the specified (as double) channel number." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1105 | .def( "lowerEnergy", &SpecUtils::EnergyCalibration::lower_energy,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1106 | "Returns lowest energy of this energy calibration." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1107 | .def( "upperEnergy", &SpecUtils::EnergyCalibration::upper_energy,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1108 | "Returns highest energy of this energy calibration." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1109 | .def( "setPolynomial", &SpecUtils::EnergyCalibration::set_polynomial,
| ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1110 | args( "NumChannels", "Coeffiecients", "DeviationPairs" ),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1111 | "Sets the energy calibration information from Polynomial defined coefficents." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/boost/python/class.hpp:261:11: note: candidate: ‘template<class Fn, class A1, class A2, class A3> boost::python::class_<T, X1, X2, X3>::self& boost::python::class_<T, X1, X2, X3>::def(const char*, Fn, const A1&, const A2&, const A3&) [with A1 = Fn; A2 = A1; A3 = A2; W = SpecUtils::EnergyCalibration; X1 = boost::python::detail::not_specified; X2 = boost::python::detail::not_specified; X3 = boost::python::detail::not_specified]’
261 | self& def(char const* name, Fn fn, A1 const& a1, A2 const& a2, A3 const& a3)
| ^~~
/usr/include/boost/python/class.hpp:261:11: note: template argument deduction/substitution failed:
/home/furutaka/res/SpecUtils/SpecUtils.git/bindings/python/SpecFile_py.cpp:1109:7: note: candidate expects 5 arguments, 4 provided
1087 | class_SpecUtils::EnergyCalibration("EnergyCalibration")
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1088 | .def( "type", &SpecUtils::EnergyCalibration::type,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1089 | "Returns the energy calibration type" )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1090 | .def( "valid", &SpecUtils::EnergyCalibration::valid,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1091 | "Returns if the energy calibration is valid." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1092 | .def( "coefficients", &SpecUtils::EnergyCalibration::coefficients, return_internal_reference<>(),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1093 | "Returns the list of energy calibration coeficients.\n"
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1094 | "Will only be empty for SpecUtils.EnergyCalType.InvalidEquationType." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1095 | // TODO: I think we should put a wrapper around channel_energies, and return a proper python list
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1096 | .def( "channelEnergies", &SpecUtils::EnergyCalibration::channel_energies, return_internal_reference<>(),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1097 | "Returns lower channel energies; will have one more entry than the number of channels." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1098 | .def( "deviationPairs", &SpecUtils::EnergyCalibration::deviation_pairs, return_internal_reference<>() )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1099 | .def( "numChannels", &SpecUtils::EnergyCalibration::num_channels,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1100 | "Returns the number of channels this energy calibration is for." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1101 | .def( "channelForEnergy", &SpecUtils::EnergyCalibration::channel_for_energy,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1102 | "Returns channel number (as a double) for the specified energy." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1103 | .def( "energyForChannel", &SpecUtils::EnergyCalibration::energy_for_channel,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1104 | "Returns energy for the specified (as double) channel number." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1105 | .def( "lowerEnergy", &SpecUtils::EnergyCalibration::lower_energy,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1106 | "Returns lowest energy of this energy calibration." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1107 | .def( "upperEnergy", &SpecUtils::EnergyCalibration::upper_energy,
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1108 | "Returns highest energy of this energy calibration." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1109 | .def( "setPolynomial", &SpecUtils::EnergyCalibration::set_polynomial,
| ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1110 | args( "NumChannels", "Coeffiecients", "DeviationPairs" ),
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
1111 | "Sets the energy calibration information from Polynomial defined coefficents." )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[2]: *** [CMakeFiles/SpecUtils.dir/build.make:524: CMakeFiles/SpecUtils.dir/bindings/python/SpecFile_py.cpp.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:83: CMakeFiles/SpecUtils.dir/all] Error 2
make: *** [Makefile:91: all] Error 2

It seems to me that there are no args() method in the present version of Boost.python or the one I use; indeed, it was alread deprecated in the oldest version that we can read its documentation....

How can we fix this? (I'm sorry at present I don't find the resolution)

Kazuyoshi

Hi there, I am trying to compile from source on a Mac. I got the following error after the following two commands:
$ cmake -DBUILD_CAMBIO_COMMAND_LINE=ON -DBUILD_CAMBIO_GUI=OFF -DBOOST_ROOT=/path/to/boost ..
$ make -j8

Error:
/Users//repos/cambio/src/CommandLineUtil.cpp:2176:16: error: no member named 'keep_energy_cal_variant' in 'SpecUtils::SpecFile'
info.keep_energy_cal_variant( prefered_variant );

In SpecUtils, it seems to be keep_energy_cal_variants not keep_energy_cal_variant, but can you please advise?

Thanks!

See gadras issue #406.

@Am6er reported in commitcomment-131492754 that there are some files that don't load correctly in InterSpec.

When I use my n42validate tool, the files all fail to validate against the N42 schema. It appears that calibration polynomials can only go up to quadratic. I made the same assumption when loading radiacode generated files. I can probably do a quick patch to not reject files with higher order calibration polynomials, but maybe emit a warning.

n42validate Calibration\ 13.01.2023.N42 
[ERROR] Calibration 13.01.2023.N42
failed validating [-5.90955288142523, 0.375881542623178, 8.4487324360803e-06, -5.64086320297731e-10, 1.22453656607698e-14] with XsdLengthFacet(value=3, fixed=True):

Reason: length has to be 3

Schema:

  <xsd:length xmlns:xsd="http://www.w3.org/2001/XMLSchema" value="3" fixed="true">
    <xsd:annotation>
      <xsd:documentation>Three and only three coefficient values are allowed.</xsd:documentation>
    </xsd:annotation>
  </xsd:length>

Instance:

  <n42:CoefficientValues xmlns:n42="http://physics.nist.gov/N42/2011/N42">-5.90955288142523 0.375881542623178 8.4487324360803E-06 -5.64086320297731E-10 1.22453656607698E-14 </n42:CoefficientValues>

Path: /{http://physics.nist.gov/N42/2011/N42}RadInstrumentData/{http://physics.nist.gov/N42/2011/N42}EnergyCalibration[1]/{http://physics.nist.gov/N42/2011/N42}CoefficientValues

---------------------------------------------------------------------------

Over in SpecUtils/bindings/python/SpecFile_py.cpp, setNeutronCounts_wrapper is:

  void setNeutronCounts_wrapper( SpecUtils::Measurement *meas,
                              boost::python::list py_counts )
  {
    vector<float> counts;
    boost::python::ssize_t n = boost::python::len( py_counts );
    for( boost::python::ssize_t i = 0; i < n; ++i )
      counts.push_back( boost::python::extract<float>( py_counts[i] ) );

    meas->set_neutron_counts( counts );
  }

On building I get an error

[ 97%] Building CXX object CMakeFiles/SpecUtils.dir/bindings/python/SpecFile_py.cpp.o
<redacted>/SpecUtils/bindings/python/SpecFile_py.cpp:427:38: error: too few arguments to function call, expected 2, have 1
    meas->set_neutron_counts( counts );
    ~~~~~~~~~~~~~~~~~~~~~~~~         ^
/Users/4uh/Research/source_localization/preprocessing/SpecUtils/SpecUtils/SpecFile.h:812:8: note: 'set_neutron_counts' declared here
  void set_neutron_counts( const std::vector<float> &counts, const float neutron_live_time );
       ^
1 error generated.
make[2]: *** [CMakeFiles/SpecUtils.dir/bindings/python/SpecFile_py.cpp.o] Error 1
make[2]: *** Waiting for unfinished jobs....
make[1]: *** [CMakeFiles/SpecUtils.dir/all] Error 2
make: *** [all] Error 2

It looks like at some point set_neutron_counts in the parent class was refactored to also take a float live time but this bit wasn't updated. As quick hack, simply changing it to meas->set_neutron_counts( counts, 0.0 ); seems to work and the code compiles.