Comments (3)
Either take a connection or connection details object . example
https://github.com/OHDSI/CohortDiagnostics/blob/master/man-roxygen/Connection.R
https://github.com/OHDSI/CohortDiagnostics/blob/master/R/RunDiagnostics.R#L91-L92
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Note: databaseSchema has replaced the use of schema in database connector, and a function may ask for databaseSchema in addition to connection (i.e. database+schema where the vocabulary is)
https://github.com/OHDSI/CohortDiagnostics/blob/master/R/RunDiagnostics.R#L95
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This has been updated on the latest commit. Issue closed. Functions below:
getConceptIdDetails(conceptsIds, connectionDetails, connection, vocabularyDatabaseSchema, oracleTempSchema, mapToStandard, simplifyToDatafreme = TRUE)
getConceptCodeDetails(conceptsCode, vocabulary, connectionDetails, connection, vocabularyDatabaseSchema, oracleTempSchema, mapToStandard, simplifyToDatafreme = TRUE)
lookupKeyword(keyword, searchType, connectionDetails, connection, vocabularyDatabaseSchema, oracleTempSchema, simplifyToDatafreme = FALSE)
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