Coder Social home page Coder Social logo

nicholascwho / tte Goto Github PK

View Code? Open in Web Editor NEW
0.0 1.0 0.0 64 KB

Code used to analyze and produce figures during tenure in the Translational Tumor Engineering Lab

Home Page: https://www.ttelab.com/

Shell 1.42% R 94.96% ImageJ Macro 3.62%
flowcytometry ngs-pipeline rna-seq scrna-seq

tte's Introduction

Translation Tumor Engineering (TTE) Lab

This repository contains code used to analyze and present bioinformatics data during my tenure in the lab (Aug 2020 - present). Folders are grouped according to the relevant papers, with details further described below.

1. HCC-Endothelial Co-culture Biomaterials 2022

Hepatocellular carcinoma organoid co-cultures mimic angiocrine crosstalk to generate inflammatory tumor microenvironment, link here.

2. HNSCC Explant on Hydrogel 2023

Bioengineered hydrogels preserve patient-derived tumor explants for evaluating immune checkpoint blockade, [in review].

3. HNSCC CAF States HA 2023

Data-driven design of tunable hydrogels recapitulate fibroblast heterogeneity in cancer, [in preparation].

4. PDAC CAF scRNA-seq 2023

In collaboration with Lab of Translational Cancer Biology (Dr Tam Wai Leong, GIS, A*STAR), [in review with Cancer Discovery].

tte's People

Contributors

nicholascwho avatar

Watchers

avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.