Small script to convert a csv output from ilastik manual tracking into a tulip friendly file
- README.md: this file
- setup.py: install script
- ilastik2tlp.py: the converting script
- Data/divsions15.csv: a test file
None
To install the script you can run the following command:
python setup.py install --user
Note that since it is just a small script that do not have dependecy, if you do not need to access it from "anywhere" on your computer, the installation part using setup.py
is not necessary.
Once install with the previous command, or from the folder containing the script, you can run the script as follow:
ilastik2tlp.py -i path/to/input.csv -o path/to/output.tlp [-at ADDED_TIME]
[-pb PROLONGE_BRANCHES] [-mt MAX_TIME]
or if you want to print the "help", run
ilastik2tlp.py -h