khp-informatics Goto Github PK

clozapine_adr_stats

statistical model analysis for clozapine adverse reaction prediction

cognition-dnc

release machine readable text from word documents, images and other files, and de-identify

cognition-jobmaker

Generates co-ordiante files for Cognition-DNC

cogstack

Distributed, fault tolerant batch processing for Natural Language Applications and Search, using remote partitioning

cogstack-plugin-signum

cohortexplorer

Explore clinical cohorts and search for entities of interest

coloc-reporter_supplementary_materials

copilot

a Containerised wOrkflow for Processing IllumiNa Genotyping microarray data

cris.feeder

Feeding Gate GCP with CRIS data streaming from SQL database

datasharing

The Leek group guide to data sharing

delly

DELLY: Structural variant discovery by integrated paired-end and split-read analysis

dementiareddit

dglinker-validation

Validation for the DGLinker webserver

dnascan

DNAscan is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring very little computational effort and memory usage.

dnascanv2

DNAscan2 is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring very little computational effort and memory usage

dnascanv2_snakemake

DNAscan2 is a fast and efficient bioinformatics pipeline that allows for the analysis of DNA Next Generation sequencing data, requiring very little computational effort and memory usage. This is the Snakemake version which is of benefit for those in HPC environments wanting to execute DNAscan2 in a parallel fashion.

docker-genetics

GWAS and related software tools

docker-squash

Squash docker images to make them smaller

dockeraf

docker files, and other bits

dockerecosystem

A running list of Docker tools

dockerstore-tool-template

dockerstore templates

dokuwiki-docker

ebencoding

Episode Bitwise Encoding for temporal medical data

epistasis

ffffffdedd

gdgdfgfd

gcp-docker

gcp-sql-input

database input handler class for Gate Cloud Paralleliser

genome-data-integration

Methods to integrate data from multiple genome sequencing datasets and form consensus variant calls

geoexplorer

gfserver-docker