Jupyter notebooks and code accompanying our paper "Identifying transposon insertions and their effects from RNA-sequencing data" in Nucleic Acids Research (2017, in press).
I have recently started using imfusion for RNA seq analysis. Thanks for the nice tool. I wanted to generate the insertion plots. I am getting error while following the SB-Analysis notebook. I performing analysis on a 64 bit Mac. I am unable to locate the GtfIterator and the GenomicDataFrame files.