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100-days-of-ml-code

100-Days-Of-ML-Code中文版

100-days-of-ml-code-1

100 Days of ML Coding

10x-scatac-2019

Publication Page for Satpathy*, Granja* et al 2019

17-021_rt_ipinivo

Mutation calling code for the paper: Radiation Therapy Enhances Immunotherapy Response in Microsatellite-stable Colorectal and Pancreatic Adenocarcinoma in a Phase II Trial

5years

agfusion

Python package to annotate and visualize gene fusions.

anly715

Class material

anndata

Annotated data matrices.

annoprobe

apm-clustering-icb-manuscript

arriba

Fast and accurate gene fusion detection from RNA-Seq data

ascpsra

将速铂下载工具进行封装，以便高效方便地批量下载SRA测序数据。

atac-seq

ATAC-seq analysis pipelines

atac-seq-1

ATAC-seq pipeline

atac-seq-2

ATAC-seq pipeline data analysis from Ciona cardiopharyngeal cells

atac-seq-3

Analysis scripts for ATAC-seq data

atacseeker

ATACseq tools for Bioconductor

atacseq_pipeline

ATAC-seq pipeline

atacseqcshl

ATAC-seq Tutorial CSHL

atacseqmutation

Scripts for aligning and processing ATAC-SEQ data and for comparing with mutation BED files

atacseqqc

ATAC-seq Quality Control

awesome-crispr

List of software/websites/databases/other stuff for genome engineering

awesome-github-profile-readme

😎 A curated list of awesome GitHub Profile READMEs 📝

awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

bam-readcount

count DNA sequence reads in BAM files

barretts-segment-length-predictor

Code to reproduce the analyses of "Automated quantification of Barrett's esophagus from non-endoscopic device predicts Barrett's segment length" by Berman et al.

batchbench

bayesmed

Default Bayesian hypothesis tests for correlation, partial correlation, and mediation

bayesprism

bcaller

Bladder Cancer Index Caller