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Issue in detection about mitefinder HOT 2 CLOSED

jhu99 avatar jhu99 commented on July 3, 2024
Issue in detection

from mitefinder.

Comments (2)

ZhangStudyHard avatar ZhangStudyHard commented on July 3, 2024

Dear Ramky,
Thanks for your question!
I have the following three suggestions, I hope they can help you.
First, reinstall the environment. This tool is already a very complete tool, and it is also very convenient to use. After many tests, no problems were found.Second, use your data and run it strictly according to the tools in the tutorial provided by this tool, it may be because you have modified the data during the running process.Third, it may be that this tool does not work very well on your data. You can download public datasets available online to try.
Finally, if you still can't solve your problem, if you can, you can send us the data set by email, and we will run it on your data.My email is [email protected].

with kind regards

HaoHuiZhang

from mitefinder.

Ramkyeri avatar Ramkyeri commented on July 3, 2024

Dear HaoHuiZhang,
Greetings!
Many thanks for your kind reply.

This is the command that I used /bin/miteFinder -input sequence.fasta -output results.txt -pattern_scoring ./profile/pattern_scoring.txt -threshold 0.5

I will update you the results.
with regards
Ramky

from mitefinder.

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