hms-dbmi Goto Github PK

irct-ext

- DEPRECATED, See https://github.com/hms-dbmi/IRCT

irct-ri

- DEPRECATED, See https://github.com/hms-dbmi/IRCT

jenkinstestrepository

This repo is only used to test Jenkins build workflow and integration with Confluence

jupyterhub-dcppc-development

A repo to support development of DCPPC requirements for Jupyterhub

jupyterhub_psama_authenticator

jwt-creator

A simple utility to create JWT tokens for development purposes. Feel free to extend if you need more claims or something.

large-scale-subtyping-of-asd-in-different-age-groups

Jupyter notebook describing the different steps of define the different ASD subtypes, in real world data

list-aws-resources

Using AWS CLI, produce a TSV summarizing AWS resources in use.

mallet_time

map-explorer

Use MAP to explore EHR data for individual patients.

matrix_storage_benchmark

mc4c-sample-data

medicationusageasdcomorbidities

Jupyter Notebooks for conducting analysis on medication usage in the treatment of co-occurring conditions in Autism Spectrum Disorder on a claims database.

merge_sra_vcf

metadataproxy

A proxy for AWS's metadata service that gives out scoped IAM credentials from STS

mhealthier

R package to assess and evaluate longitudinal mHealth sensor data.

mod_auth_openidc

OpenID Connect Relying Party and OAuth 2.0 Resource Server for Apache HTTP Server 2.x

moma

MOMA

ngehlenborgbmi713r

Example package for BMI 713

oauthenticator

GitHub OAuth + JupyterHub Authenticator = OAuthenticator

ome-tiff-tiler

Creates a Docker image that can create tiles from OME-TIFF files

oncothreads

OncoThreads longitudinal cancer genomics visualization project.

open-pic-sure-bdc-frontend

open-pic-sure-bdc-release-control

BDC Open Access without Login Release Control

open-pic-sure-bdc-release-control-integration

BDC PIC-SURE Open Access without Login Integration Release Control

openclinica

OpenClinica is the world's first commercial open source clinical trial software for Electronic Data Capture (EDC) Clinical Data Management (CDM).

phenotips

PhenoTips provides an easy-to-use Web interface and standardized database back-end for collecting clinical findings observed in patients with possible genetic disorders.

phewasubtype

pic-sure

PIC-SURE API

pic-sure-2-examples

Examples of using PIC-SURE 2 and its resources in various languages