hms-dbmi Goto Github PK

cistrome-higlass-demo

HiGlass demo with Cistrome data sets.

comorbidityphewas

connections.careers

Website for a video project that documents the training experiences of predoctoral and postdoctoral trainees from 16 National Library of Medicine-funded biomedical informatics and data science training programs.

contraceptionontwitter

This repository contains the step by step notebooks to run a sentiment analysis about contraception on Twitter

copdgene-datastage-jupyter-examples

copdgene-wgs

covid-race-visualization-notebook

crestree

Neural Crest Fate Decisions

dbgap-i2b2tm-treebuilder

Builds i2b2 tranSMART ontology from an dbGaP study

dbgap2i2b2tm

Extraction and curation pipeline from dbGap phenotype files to the PIC-SURE plaform

dbgap2x

dbmi-aws-waf

This repository contains example scripts and sets of rules for the AWS WAF service. Please be aware that the applicability of these examples to specific workloads may vary.

dbmi-fileservice

dbmi-r-java-docker

dbmisvc-docker

A framework for bootstrapping services in a Docker image

dbmisvc-stack

dbmisvc-starter

dcppc

Data Commons Pilot Phase Project

decart-2019-data-visualization

Materials for the DeCART 2019 Summer School Data Visualization Course

django-bootstrap-dynamic-formsets

JavaScript-enhanced dynamic formsets using Bootstrap

django-dbmi-client

A Django application to integrate with DBMI services

django-session-security

A little javascript and middleware work together to ensure that the user was active during the past X minutes in any tab he has open. Otherwise, display a warning leaving a couple of minutes to show any kind of activity like moving the mouse. Otherwise, logout the user.

docker-commons-plugin

docker-images

This repository stores Dockerfiles and samples to build Docker images for Avillach Lab hms-dbmi projects.

dockerspawner

Spawns JupyterHub user servers in Docker containers

drug_explorer

Interactive & explainable GNN for drug repurposing

dseqr

single-cell and bulk RNA-seq analyses from counts → pathways → drug candidates.

dseqr.aws

AWS CDK scripts to deploy infrastructure for dseqr app

dseqr.data

data for drugseqr package

dseqr.deploy

Deploy dseqr infrastructure using lambda function